Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   DV130_RS07975 Genome accession   NZ_CP031248
Coordinates   1496336..1497094 (-) Length   252 a.a.
NCBI ID   WP_000410378.1    Uniprot ID   A0A064C0A8
Organism   Streptococcus pneumoniae strain M26365     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1491336..1502094
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DV130_RS07955 - 1492177..1492437 (+) 261 WP_001863363.1 hypothetical protein -
  DV130_RS12780 - 1492644..1492778 (+) 135 WP_275895218.1 hypothetical protein -
  DV130_RS07960 - 1493208..1493402 (-) 195 WP_000285194.1 DUF951 family protein -
  DV130_RS07965 dnaN 1493467..1494603 (-) 1137 WP_000581157.1 DNA polymerase III subunit beta -
  DV130_RS07970 dnaA 1494762..1496123 (-) 1362 WP_000660618.1 chromosomal replication initiator protein DnaA -
  DV130_RS07975 spo0J 1496336..1497094 (-) 759 WP_000410378.1 ParB/RepB/Spo0J family partition protein Regulator
  DV130_RS07980 htrA 1497152..1498333 (-) 1182 WP_000681601.1 S1C family serine protease Regulator
  DV130_RS07985 rlmH 1498516..1498995 (+) 480 WP_000695929.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  DV130_RS07995 comC/comC1 1499277..1499402 (+) 126 WP_000799689.1 competence-stimulating peptide ComC Regulator
  DV130_RS08000 comD/comD1 1499423..1500748 (+) 1326 WP_000362880.1 competence system sensor histidine kinase ComD Regulator
  DV130_RS08005 comE 1500745..1501497 (+) 753 WP_000866065.1 competence system response regulator transcription factor ComE Regulator

Sequence

Protein


Download         Length: 252 a.a.        Molecular weight: 29153.50 Da        Isoelectric Point: 9.0667

>NTDB_id=304851 DV130_RS07975 WP_000410378.1 1496336..1497094(-) (spo0J) [Streptococcus pneumoniae strain M26365]
MEKFEMISITDIQKNPYQPRKEFDREKLDELAQSIKENGVIQPIIVRQSPVIGYEILAGERRYRASLLAGLRSIPAVVKQ
ISDQEMMVQSIIENLQRENLNPIEEARAYESLVEKGFTHAEIADKMGKSRPYISNSIRLLSLPEQILSEVENGKLSQAHA
RSLVGLNKEQQDYFFQRIIEEDISVRKLEALLTEKKQKKQQKTNHFIQNEEKQLRKLLGLDVEIKLSKKDSGKIIISFSN
QEEYSRIINSLK

Nucleotide


Download         Length: 759 bp        

>NTDB_id=304851 DV130_RS07975 WP_000410378.1 1496336..1497094(-) (spo0J) [Streptococcus pneumoniae strain M26365]
ATGGAAAAATTTGAAATGATTTCTATCACAGATATACAAAAAAATCCCTATCAACCCCGAAAAGAATTTGATAGAGAAAA
ACTAGATGAACTAGCACAGTCTATCAAAGAAAATGGGGTCATTCAACCGATTATTGTTCGTCAATCTCCTGTTATTGGTT
ATGAAATCCTTGCAGGAGAGAGACGCTATCGGGCTTCACTTTTAGCTGGTCTACGGTCTATCCCAGCTGTTGTTAAACAG
ATTTCAGACCAAGAGATGATGGTCCAGTCCATTATTGAAAATTTACAGAGAGAAAATTTAAACCCAATAGAAGAAGCACG
CGCCTATGAATCTCTCGTAGAGAAAGGATTCACCCATGCTGAAATTGCAGATAAGATGGGCAAGTCTCGTCCATATATCA
GCAACTCCATTCGTTTACTTTCCTTGCCAGAACAGATTCTTTCAGAAGTAGAAAATGGCAAACTATCACAAGCCCATGCG
CGTTCCCTAGTTGGGTTAAATAAGGAACAACAAGACTATTTCTTTCAACGGATTATAGAAGAAGATATTTCTGTAAGGAA
ATTAGAAGCTCTTCTGACAGAGAAAAAACAAAAGAAACAGCAAAAAACTAATCATTTCATACAAAATGAAGAAAAACAGT
TAAGAAAACTACTCGGATTAGATGTAGAAATTAAACTATCTAAAAAAGACAGTGGAAAAATCATTATTTCTTTTTCAAAT
CAAGAAGAATATAGTAGAATTATCAACAGCCTGAAATAA

Domains

Predicted by InterproScan.

ParB/Sulfiredoxin domain (ParB_N)

(6-94)

HTH domain found in ParB protein (HTH_ParB)

(144-192)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A064C0A8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

50.593

100

0.508

Multiple sequence alignment