Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   DV119_RS02990 Genome accession   NZ_CP031245
Coordinates   529617..530375 (+) Length   252 a.a.
NCBI ID   WP_000410378.1    Uniprot ID   A0A064C0A8
Organism   Streptococcus pneumoniae strain M16808     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 524617..535375
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DV119_RS02960 comE 525214..525966 (-) 753 WP_000866065.1 competence system response regulator transcription factor ComE Regulator
  DV119_RS02965 comD/comD1 525963..527288 (-) 1326 WP_000362880.1 competence system sensor histidine kinase ComD Regulator
  DV119_RS02970 comC/comC1 527309..527434 (-) 126 WP_000799689.1 competence-stimulating peptide ComC Regulator
  DV119_RS02980 rlmH 527716..528195 (-) 480 WP_000695929.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  DV119_RS02985 htrA 528378..529559 (+) 1182 WP_000681601.1 S1C family serine protease Regulator
  DV119_RS02990 spo0J 529617..530375 (+) 759 WP_000410378.1 ParB/RepB/Spo0J family partition protein Regulator
  DV119_RS02995 dnaA 530588..531949 (+) 1362 WP_000660615.1 chromosomal replication initiator protein DnaA -
  DV119_RS03000 dnaN 532108..533244 (+) 1137 WP_000581157.1 DNA polymerase III subunit beta -
  DV119_RS03005 - 533309..533503 (+) 195 WP_000285194.1 DUF951 domain-containing protein -
  DV119_RS03010 ychF 533587..534702 (+) 1116 WP_001218707.1 redox-regulated ATPase YchF -
  DV119_RS03015 pth 534773..535342 (+) 570 WP_000163931.1 aminoacyl-tRNA hydrolase -

Sequence

Protein


Download         Length: 252 a.a.        Molecular weight: 29153.50 Da        Isoelectric Point: 9.0667

>NTDB_id=304627 DV119_RS02990 WP_000410378.1 529617..530375(+) (spo0J) [Streptococcus pneumoniae strain M16808]
MEKFEMISITDIQKNPYQPRKEFDREKLDELAQSIKENGVIQPIIVRQSPVIGYEILAGERRYRASLLAGLRSIPAVVKQ
ISDQEMMVQSIIENLQRENLNPIEEARAYESLVEKGFTHAEIADKMGKSRPYISNSIRLLSLPEQILSEVENGKLSQAHA
RSLVGLNKEQQDYFFQRIIEEDISVRKLEALLTEKKQKKQQKTNHFIQNEEKQLRKLLGLDVEIKLSKKDSGKIIISFSN
QEEYSRIINSLK

Nucleotide


Download         Length: 759 bp        

>NTDB_id=304627 DV119_RS02990 WP_000410378.1 529617..530375(+) (spo0J) [Streptococcus pneumoniae strain M16808]
ATGGAAAAATTTGAAATGATTTCTATCACAGATATACAAAAAAATCCCTATCAACCCCGAAAAGAATTTGATAGAGAAAA
ACTAGATGAACTAGCACAGTCTATCAAAGAAAATGGGGTCATTCAACCGATTATTGTTCGTCAATCTCCTGTTATTGGTT
ATGAAATCCTTGCAGGAGAGAGACGCTATCGGGCTTCACTTTTAGCTGGTCTACGGTCTATCCCAGCTGTTGTTAAACAG
ATTTCAGACCAAGAGATGATGGTCCAGTCCATTATTGAAAATTTACAGAGAGAAAATTTAAACCCAATAGAAGAAGCACG
CGCCTATGAATCTCTCGTAGAGAAAGGATTCACCCATGCTGAAATTGCAGATAAGATGGGCAAGTCTCGTCCATATATCA
GCAACTCCATTCGTTTACTTTCCTTGCCAGAACAGATTCTTTCAGAAGTAGAAAATGGCAAACTATCACAAGCCCATGCG
CGTTCCCTAGTTGGGTTAAATAAGGAACAACAAGACTATTTCTTTCAACGGATTATAGAAGAAGATATTTCTGTAAGGAA
ATTAGAAGCTCTTCTGACAGAGAAAAAACAAAAGAAACAGCAAAAAACTAATCATTTCATACAAAATGAAGAAAAACAGT
TAAGAAAACTACTCGGATTAGATGTAGAAATTAAACTATCTAAAAAAGACAGTGGAAAAATCATTATTTCTTTTTCAAAT
CAAGAAGAATATAGTAGAATTATCAACAGCCTGAAATAA

Domains

Predicted by InterproScan.

ParB/Sulfiredoxin domain (ParB_N)

(6-94)

HTH domain found in ParB protein (HTH_ParB)

(144-192)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A064C0A8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

50.593

100

0.508

Multiple sequence alignment