Detailed information
Bioinformatically predicted
Overview
| Name | comP | Type | Machinery gene |
| Locus tag | DV369_RS02985 | Genome accession | NZ_CP031239 |
| Coordinates | 587295..587978 (+) | Length | 227 a.a. |
| NCBI ID | WP_050948681.1 | Uniprot ID | - |
| Organism | Haemophilus influenzae strain M13034 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 582295..592978
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DV369_RS02960 | - | 582518..583048 (-) | 531 | WP_050948686.1 | DsbE family thiol:disulfide interchange protein | - |
| DV369_RS02965 | nrfE | 583048..584955 (-) | 1908 | WP_050948685.1 | heme lyase NrfEFG subunit NrfE | - |
| DV369_RS02970 | suhB | 585064..585867 (-) | 804 | WP_050948684.1 | inositol-1-monophosphatase | - |
| DV369_RS02975 | comN | 586067..586579 (+) | 513 | WP_050948683.1 | type II secretion system protein | Machinery gene |
| DV369_RS02980 | comO | 586579..587298 (+) | 720 | WP_050948682.1 | type II secretion system protein J | Machinery gene |
| DV369_RS02985 | comP | 587295..587978 (+) | 684 | WP_050948681.1 | DUF2572 family protein | Machinery gene |
| DV369_RS02990 | comQ | 587971..588258 (+) | 288 | WP_050948680.1 | DUF5374 domain-containing protein | Machinery gene |
| DV369_RS02995 | recC | 588304..591675 (+) | 3372 | WP_050948679.1 | exodeoxyribonuclease V subunit gamma | - |
| DV369_RS03000 | nrdR | 591737..592186 (+) | 450 | WP_005627362.1 | transcriptional regulator NrdR | - |
Sequence
Protein
Download Length: 227 a.a. Molecular weight: 25456.29 Da Isoelectric Point: 8.9376
>NTDB_id=304433 DV369_RS02985 WP_050948681.1 587295..587978(+) (comP) [Haemophilus influenzae strain M13034]
MTIQKGIITLTILIFISGLLTAILLLDDSHLSFFRVQQNQRKLYVERTLQLQKMTAAKKQTACLDLPLNNDESVKQISIT
LDGATDSIQYFLWCERMSLFKKSPKKGDNQGALKDFIHTEKLTDFRPHFSSPPRILNANKTPKLYWFSDSQAEVEINGTV
SAVLIAEGDLKLTGKGRISGAVITNGNLTLDGVTLAYGKKTVVALVQQYSQWQLAEKSWSDFNVQDE
MTIQKGIITLTILIFISGLLTAILLLDDSHLSFFRVQQNQRKLYVERTLQLQKMTAAKKQTACLDLPLNNDESVKQISIT
LDGATDSIQYFLWCERMSLFKKSPKKGDNQGALKDFIHTEKLTDFRPHFSSPPRILNANKTPKLYWFSDSQAEVEINGTV
SAVLIAEGDLKLTGKGRISGAVITNGNLTLDGVTLAYGKKTVVALVQQYSQWQLAEKSWSDFNVQDE
Nucleotide
Download Length: 684 bp
>NTDB_id=304433 DV369_RS02985 WP_050948681.1 587295..587978(+) (comP) [Haemophilus influenzae strain M13034]
ATGACAATACAAAAAGGTATTATCACGCTGACTATTTTGATTTTTATTTCGGGTTTATTAACCGCAATTTTGTTGTTAGA
TGATAGCCATTTAAGTTTTTTTCGTGTGCAACAAAATCAACGAAAACTGTATGTGGAAAGAACATTACAACTGCAAAAAA
TGACAGCGGCGAAAAAACAAACTGCCTGCCTTGATTTACCGTTAAATAATGATGAAAGTGTGAAGCAAATCAGCATTACG
CTTGATGGTGCCACAGATTCAATTCAATATTTTCTTTGGTGTGAAAGAATGAGCCTATTTAAAAAATCGCCTAAAAAGGG
AGATAATCAAGGTGCATTGAAAGATTTCATTCACACAGAAAAACTTACAGATTTTCGACCGCACTTTTCTTCCCCACCCA
GAATTTTAAACGCGAATAAAACACCTAAACTTTATTGGTTTTCAGATTCACAAGCGGAAGTTGAAATTAATGGCACAGTG
TCTGCCGTATTAATTGCAGAGGGCGATTTAAAATTGACTGGCAAAGGGAGGATTAGTGGCGCAGTGATTACCAACGGGAA
TTTAACTTTAGATGGCGTAACTTTAGCTTATGGGAAAAAGACGGTGGTTGCTTTAGTGCAACAATATAGTCAGTGGCAGT
TAGCAGAAAAAAGTTGGAGTGATTTTAATGTTCAGGATGAATAA
ATGACAATACAAAAAGGTATTATCACGCTGACTATTTTGATTTTTATTTCGGGTTTATTAACCGCAATTTTGTTGTTAGA
TGATAGCCATTTAAGTTTTTTTCGTGTGCAACAAAATCAACGAAAACTGTATGTGGAAAGAACATTACAACTGCAAAAAA
TGACAGCGGCGAAAAAACAAACTGCCTGCCTTGATTTACCGTTAAATAATGATGAAAGTGTGAAGCAAATCAGCATTACG
CTTGATGGTGCCACAGATTCAATTCAATATTTTCTTTGGTGTGAAAGAATGAGCCTATTTAAAAAATCGCCTAAAAAGGG
AGATAATCAAGGTGCATTGAAAGATTTCATTCACACAGAAAAACTTACAGATTTTCGACCGCACTTTTCTTCCCCACCCA
GAATTTTAAACGCGAATAAAACACCTAAACTTTATTGGTTTTCAGATTCACAAGCGGAAGTTGAAATTAATGGCACAGTG
TCTGCCGTATTAATTGCAGAGGGCGATTTAAAATTGACTGGCAAAGGGAGGATTAGTGGCGCAGTGATTACCAACGGGAA
TTTAACTTTAGATGGCGTAACTTTAGCTTATGGGAAAAAGACGGTGGTTGCTTTAGTGCAACAATATAGTCAGTGGCAGT
TAGCAGAAAAAAGTTGGAGTGATTTTAATGTTCAGGATGAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comP | Haemophilus influenzae Rd KW20 |
92.952 |
100 |
0.93 |