Detailed information    

insolico Bioinformatically predicted

Overview

Name   comN   Type   Machinery gene
Locus tag   DV441_RS06755 Genome accession   NZ_CP031238
Coordinates   1394304..1394822 (-) Length   172 a.a.
NCBI ID   WP_046953321.1    Uniprot ID   A0A0M3G834
Organism   Haemophilus haemolyticus strain M28486     
Function   type IV pilus biogenesis and function (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1389304..1399822
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DV441_RS06740 comQ 1392616..1392903 (-) 288 WP_032825578.1 DUF5374 domain-containing protein Machinery gene
  DV441_RS06745 comP 1392896..1393579 (-) 684 WP_046953322.1 DUF2572 family protein Machinery gene
  DV441_RS06750 comO 1393594..1394310 (-) 717 WP_032825585.1 PulJ/GspJ family protein Machinery gene
  DV441_RS06755 comN 1394304..1394822 (-) 519 WP_046953321.1 type II secretion system protein Machinery gene
  DV441_RS06760 suhB 1395022..1395825 (+) 804 WP_005633301.1 inositol-1-monophosphatase -
  DV441_RS06765 nrfE 1396065..1397972 (+) 1908 WP_114892582.1 heme lyase NrfEFG subunit NrfE -
  DV441_RS06770 - 1397972..1398502 (+) 531 WP_046953319.1 DsbE family thiol:disulfide interchange protein -
  DV441_RS06775 nrfF 1398499..1399656 (+) 1158 WP_046953318.1 heme lyase NrfEFG subunit NrfF -

Sequence

Protein


Download         Length: 172 a.a.        Molecular weight: 19851.95 Da        Isoelectric Point: 9.1777

>NTDB_id=304412 DV441_RS06755 WP_046953321.1 1394304..1394822(-) (comN) [Haemophilus haemolyticus strain M28486]
MQKGVTLVELLIGLAIISIALSFAVPLWQTDSPKTILAKEQHRLYLFLRQIQARAENSSEVWFLLINRNLATQQWCLTAQ
VKNDQTCDCLNPINCPKEAYAHFYYPYFPKKTMIQSHYIYPKEITRFYGARNTSVTRCFILQAENERTLFSFFNVGSIRL
KTNQAASACNQS

Nucleotide


Download         Length: 519 bp        

>NTDB_id=304412 DV441_RS06755 WP_046953321.1 1394304..1394822(-) (comN) [Haemophilus haemolyticus strain M28486]
ATGCAGAAAGGTGTGACATTAGTGGAATTATTGATTGGGCTAGCAATTATCAGCATTGCGCTGAGTTTTGCCGTGCCATT
ATGGCAAACAGACTCACCTAAAACGATTTTAGCCAAAGAGCAACATCGCCTGTATTTATTTCTACGACAAATTCAAGCTC
GGGCAGAAAATTCATCAGAAGTCTGGTTCCTGCTGATAAATCGTAACCTTGCGACACAACAATGGTGCTTAACGGCACAA
GTAAAAAATGATCAAACTTGCGATTGTTTAAACCCAATAAACTGCCCGAAAGAAGCCTATGCTCATTTTTACTATCCTTA
TTTTCCTAAAAAAACGATGATTCAAAGCCATTATATTTATCCCAAAGAAATCACGAGGTTTTATGGTGCGCGTAATACCA
GTGTGACTCGTTGCTTTATTCTGCAAGCGGAAAATGAACGTACATTATTTTCATTTTTCAATGTTGGCAGTATTCGTTTG
AAAACCAATCAAGCGGCTAGTGCATGCAATCAATCATGA

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(2-24)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0M3G834

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comN Haemophilus influenzae Rd KW20

91.765

98.837

0.907

Multiple sequence alignment