Detailed information NTG0304391

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: DV441_RS04320
• Genome accession: NZ_CP031238
• Coordinates: 907928..908992 (-)
• Length: 354 a.a.
• NCBI ID: WP_005636084.1
• Uniprot ID: -
• Organism: Haemophilus haemolyticus strain M28486
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 902928..913992

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DV441_RS04295	hcp	903297..904949 (+)	1653	WP_046953373.1	hydroxylamine reductase	-
DV441_RS04300	hcr	905053..906075 (+)	1023	WP_046953372.1	NADH oxidoreductase	-
DV441_RS04305	-	906188..907006 (+)	819	WP_046953371.1	Cof-type HAD-IIB family hydrolase	-
DV441_RS04310	crcB	907006..907392 (+)	387	WP_046953370.1	fluoride efflux transporter CrcB	-
DV441_RS04315	recX	907389..907847 (-)	459	WP_046953369.1	recombination regulator RecX	-
DV441_RS04320	recA	907928..908992 (-)	1065	WP_005636084.1	recombinase RecA	Machinery gene
DV441_RS04325	sxy/tfoX	909380..910033 (+)	654	WP_080948131.1	DNA transformation protein TfoX	Regulator

Sequence

Protein

• Length: 354 a.a.
• Molecular weight: 38073.54 Da
• Isoelectric Point: 4.9744

>NTDB_id=304391 DV441_RS04320 WP_005636084.1 907928..908992(-) (recA) [Haemophilus haemolyticus strain M28486]
MATKEEKQKALAAALGQIEKQFGKGSIMKLGDTKTLDVESISTGSLGLDVALGIGGLPMGRIVEIFGPESSGKTTLTLSV
IAQAQKAGKTCAFIDAEHALDPIYAAKLGVDVKELFVSQPDNGEQALEICDALVRSGAIDVIIVDSVAALTPKAEIEGDM
GDSHMGLQARLMSQALRKLTGQIKNANCLVVFINQIRMKIGVMFGNPETTTGGNALKFYSSVRLDIRRTGSVKDGENIIG
NETRVKVVKNKLAAPFRQVDFQILYGEGISKAGELLELGVKHKLVEKSGAWYAYNGEKIGQGKTNSMKWLNENPEKADEL
EARLRAELVANPEQALMADIEQSENSSESESDFE

Nucleotide

• Length: 1065 bp

>NTDB_id=304391 DV441_RS04320 WP_005636084.1 907928..908992(-) (recA) [Haemophilus haemolyticus strain M28486]
ATGGCGACTAAAGAAGAAAAACAAAAAGCACTAGCTGCAGCATTAGGACAAATCGAAAAACAATTTGGTAAAGGCTCAAT
TATGAAGTTAGGTGATACCAAAACGTTGGATGTAGAATCTATTTCTACCGGATCACTTGGCTTAGATGTTGCACTAGGAA
TTGGTGGTTTACCTATGGGACGAATTGTAGAAATTTTCGGGCCTGAATCATCTGGTAAAACAACATTGACTCTTTCCGTC
ATTGCTCAAGCACAAAAAGCGGGAAAAACCTGTGCATTTATTGATGCAGAACACGCCCTTGATCCTATTTATGCAGCAAA
ACTTGGGGTGGATGTAAAAGAACTTTTTGTTTCTCAACCTGATAATGGTGAACAAGCGCTTGAAATCTGTGATGCATTAG
TTCGATCTGGCGCAATTGATGTAATCATTGTAGACTCCGTTGCCGCACTGACACCAAAAGCTGAAATTGAAGGGGATATG
GGTGATTCCCATATGGGGCTACAGGCTCGTTTAATGTCACAAGCTTTGCGTAAACTTACTGGCCAAATTAAAAATGCAAA
CTGTTTAGTTGTATTTATTAACCAAATCCGAATGAAAATAGGTGTGATGTTTGGTAACCCTGAAACCACCACTGGCGGTA
ATGCATTAAAATTCTATTCTTCTGTTCGCTTAGATATCCGTCGCACTGGTTCTGTAAAAGATGGCGAAAATATTATTGGA
AATGAAACCCGCGTAAAAGTAGTAAAAAACAAACTAGCGGCACCATTCCGTCAAGTAGATTTCCAAATTCTTTATGGCGA
AGGTATCTCAAAAGCAGGGGAATTATTAGAACTTGGTGTAAAACACAAGCTTGTAGAGAAATCAGGTGCATGGTATGCCT
ATAATGGAGAAAAAATTGGCCAAGGTAAAACTAACTCAATGAAATGGCTCAATGAAAATCCAGAAAAAGCTGATGAATTA
GAAGCACGTTTACGCGCAGAATTAGTGGCTAATCCAGAACAAGCTTTAATGGCTGACATTGAACAATCTGAAAATAGTTC
AGAATCAGAAAGTGATTTTGAATAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (9-270)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Glaesserella parasuis strain SC1401	76.301	97.74	0.746
recA	Vibrio cholerae strain A1552	76.9	92.938	0.715
recA	Vibrio cholerae O1 biovar El Tor strain E7946	76.9	92.938	0.715
recA	Pseudomonas stutzeri DSM 10701	75.692	91.808	0.695
recA	Neisseria gonorrhoeae MS11	74.613	91.243	0.681
recA	Neisseria gonorrhoeae MS11	74.613	91.243	0.681
recA	Neisseria gonorrhoeae strain FA1090	74.613	91.243	0.681
recA	Acinetobacter baylyi ADP1	68.195	98.588	0.672
recA	Acinetobacter baumannii D1279779	70.769	91.808	0.65
recA	Ralstonia pseudosolanacearum GMI1000	70.846	90.113	0.638
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	63.363	94.068	0.596
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	64.984	89.548	0.582
recA	Helicobacter pylori 26695	60.588	96.045	0.582
recA	Helicobacter pylori strain NCTC11637	60	96.045	0.576
recA	Streptococcus mutans UA159	56.215	100	0.562
recA	Streptococcus pneumoniae TIGR4	56.41	99.153	0.559
recA	Streptococcus pneumoniae R6	56.41	99.153	0.559
recA	Streptococcus pneumoniae Rx1	56.41	99.153	0.559
recA	Streptococcus pneumoniae D39	56.41	99.153	0.559
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	60.55	92.373	0.559
recA	Bacillus subtilis subsp. subtilis str. 168	63.961	87.006	0.556
recA	Streptococcus mitis NCTC 12261	58.41	92.373	0.54
recA	Streptococcus mitis SK321	58.104	92.373	0.537
recA	Latilactobacillus sakei subsp. sakei 23K	58.514	91.243	0.534
recA	Streptococcus pyogenes NZ131	56.707	92.655	0.525
recA	Lactococcus lactis subsp. cremoris KW2	56.308	91.808	0.517