Detailed information NTG0304378

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: DV365_RS08665
• Genome accession: NZ_CP031237
• Coordinates: 1760183..1761247 (-)
• Length: 354 a.a.
• NCBI ID: WP_050847756.1
• Uniprot ID: -
• Organism: Haemophilus influenzae strain M12125
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1755183..1766247

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DV365_RS08640	arcC	1756095..1757027 (-)	933	WP_005661976.1	carbamate kinase	-
DV365_RS08645	-	1757037..1758041 (-)	1005	WP_005651072.1	ornithine carbamoyltransferase	-
DV365_RS08650	-	1758445..1759263 (+)	819	WP_114890695.1	Cof-type HAD-IIB family hydrolase	-
DV365_RS08655	crcB	1759263..1759649 (+)	387	WP_005658943.1	fluoride efflux transporter CrcB	-
DV365_RS08660	recX	1759646..1760104 (-)	459	WP_038439484.1	recombination regulator RecX	-
DV365_RS08665	recA	1760183..1761247 (-)	1065	WP_050847756.1	recombinase RecA	Machinery gene
DV365_RS08670	sxy/tfoX	1761620..1762273 (+)	654	WP_005694574.1	DNA transformation protein TfoX	Regulator

Sequence

Protein

• Length: 354 a.a.
• Molecular weight: 38148.56 Da
• Isoelectric Point: 4.8875

>NTDB_id=304378 DV365_RS08665 WP_050847756.1 1760183..1761247(-) (recA) [Haemophilus influenzae strain M12125]
MATQEEKQKALAAALGQIEKQFGKGSIMKLGDTKTLDVESISTGSLGLDVALGIGGLPMGRIVEIFGPESSGKTTLTLSV
IAQAQKAGKTCAFIDAEHALDPIYAAKLGVDVKELFVSQPDNGEQALEICDALVRSGAIDVIIVDSVAALTPKAEIEGDM
GDSHMGLQARLMSQALRKLTGQIKNANCLVVFINQIRMKIGVMFGNPETTTGGNALKFYSSVRLDIRRTGSVKDGENIIG
NETRVKVVKNKLAAPFRQVDFQILYGEGISKAGELLELGVKHKLVEKSGAWYSYNGEKIGQGKANSMKWLNENIEKSDEL
ESRLRAELVANPEQALMADIEQSENNTESESDFE

Nucleotide

• Length: 1065 bp

>NTDB_id=304378 DV365_RS08665 WP_050847756.1 1760183..1761247(-) (recA) [Haemophilus influenzae strain M12125]
ATGGCAACTCAAGAAGAAAAACAAAAAGCCCTAGCGGCTGCACTAGGGCAAATCGAAAAACAATTTGGTAAAGGCTCAAT
TATGAAATTAGGCGATACCAAAACGTTGGATGTAGAGTCTATTTCTACTGGATCACTTGGGTTAGATGTTGCGCTAGGGA
TTGGTGGTTTGCCTATGGGTCGAATTGTAGAAATTTTCGGGCCTGAATCATCGGGTAAAACAACATTAACTCTTTCCGTC
ATTGCTCAAGCGCAAAAAGCAGGAAAAACCTGTGCATTTATTGATGCAGAACACGCACTTGATCCTATTTATGCAGCAAA
ACTTGGTGTAGATGTAAAAGAACTTTTTGTTTCTCAACCAGATAATGGGGAACAGGCACTTGAAATCTGTGATGCATTAG
TTCGCTCAGGTGCAATTGATGTAATTATTGTGGACTCCGTTGCCGCACTGACACCAAAAGCTGAAATTGAAGGCGATATG
GGTGATTCTCATATGGGTCTACAAGCGCGTTTAATGTCTCAAGCTTTGCGTAAACTCACAGGTCAAATTAAAAATGCAAA
CTGTCTAGTTGTGTTTATTAACCAAATCCGTATGAAAATAGGCGTGATGTTTGGTAACCCTGAAACCACCACAGGCGGTA
ATGCATTAAAATTCTATTCTTCTGTTCGCTTAGATATTCGCCGTACAGGTTCTGTAAAAGATGGCGAAAATATTATTGGA
AATGAAACTCGCGTAAAAGTAGTAAAAAACAAATTAGCGGCACCGTTCCGCCAAGTGGATTTCCAAATTCTCTATGGAGA
AGGCATTTCAAAAGCAGGAGAATTACTGGAACTAGGGGTAAAACACAAACTTGTAGAAAAATCAGGTGCCTGGTATTCCT
ATAATGGCGAAAAAATTGGTCAAGGAAAGGCTAATTCAATGAAATGGCTTAACGAAAATATAGAGAAATCAGATGAATTA
GAATCTCGTTTACGTGCAGAATTAGTGGCTAATCCAGAACAAGCCTTAATGGCGGATATTGAACAATCTGAAAATAATAC
TGAATCAGAAAGTGATTTTGAATAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (9-270)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Glaesserella parasuis strain SC1401	75.429	98.87	0.746
recA	Vibrio cholerae strain A1552	74.203	97.458	0.723
recA	Vibrio cholerae O1 biovar El Tor strain E7946	74.203	97.458	0.723
recA	Pseudomonas stutzeri DSM 10701	75.385	91.808	0.692
recA	Neisseria gonorrhoeae MS11	74.613	91.243	0.681
recA	Neisseria gonorrhoeae MS11	74.613	91.243	0.681
recA	Neisseria gonorrhoeae strain FA1090	74.613	91.243	0.681
recA	Acinetobacter baylyi ADP1	68.481	98.588	0.675
recA	Acinetobacter baumannii D1279779	70.769	91.808	0.65
recA	Ralstonia pseudosolanacearum GMI1000	70.846	90.113	0.638
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	62.202	94.915	0.59
recA	Helicobacter pylori 26695	60.588	96.045	0.582
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	64.669	89.548	0.579
recA	Helicobacter pylori strain NCTC11637	60	96.045	0.576
recA	Streptococcus pneumoniae R6	56.695	99.153	0.562
recA	Streptococcus pneumoniae Rx1	56.695	99.153	0.562
recA	Streptococcus pneumoniae D39	56.695	99.153	0.562
recA	Streptococcus pneumoniae TIGR4	56.695	99.153	0.562
recA	Bacillus subtilis subsp. subtilis str. 168	64.286	87.006	0.559
recA	Streptococcus mutans UA159	55.932	100	0.559
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	60.55	92.373	0.559
recA	Streptococcus mitis NCTC 12261	58.41	92.373	0.54
recA	Streptococcus mitis SK321	58.104	92.373	0.537
recA	Latilactobacillus sakei subsp. sakei 23K	58.514	91.243	0.534
recA	Streptococcus pyogenes NZ131	56.707	92.655	0.525
recA	Lactococcus lactis subsp. cremoris KW2	56	91.808	0.514