Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   PLA107_RS30455 Genome accession   NZ_CP031225
Coordinates   5350489..5350899 (-) Length   136 a.a.
NCBI ID   WP_002551738.1    Uniprot ID   A0AAT9SFQ2
Organism   Pseudomonas amygdali pv. lachrymans str. M301315     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 5345489..5355899
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PLA107_RS30440 (PLA107_026005) - 5347432..5349474 (-) 2043 WP_002551741.1 methyl-accepting chemotaxis protein -
  PLA107_RS30445 (PLA107_026010) - 5349523..5350062 (-) 540 WP_002551740.1 chemotaxis protein CheW -
  PLA107_RS30450 (PLA107_026015) pilH 5350077..5350442 (-) 366 WP_002551739.1 twitching motility response regulator PilH -
  PLA107_RS30455 (PLA107_026020) pilG 5350489..5350899 (-) 411 WP_002551738.1 twitching motility response regulator PilG Regulator
  PLA107_RS30460 (PLA107_026025) gshB 5351144..5352103 (+) 960 WP_005743059.1 glutathione synthase -
  PLA107_RS30465 (PLA107_026030) - 5352260..5353162 (+) 903 WP_016982509.1 energy transducer TonB -
  PLA107_RS30470 (PLA107_026035) - 5353238..5353810 (+) 573 WP_002551735.1 YqgE/AlgH family protein -
  PLA107_RS30475 (PLA107_026040) ruvX 5353810..5354250 (+) 441 WP_002551734.1 Holliday junction resolvase RuvX -
  PLA107_RS30480 (PLA107_026045) pyrR 5354350..5354862 (+) 513 WP_002551733.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  PLA107_RS30485 (PLA107_026050) - 5354875..5355879 (+) 1005 WP_004666454.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 136 a.a.        Molecular weight: 14943.42 Da        Isoelectric Point: 8.5283

>NTDB_id=304239 PLA107_RS30455 WP_002551738.1 5350489..5350899(-) (pilG) [Pseudomonas amygdali pv. lachrymans str. M301315]
MEQHASALKVMVIDDSKTIRRTAETLLKNAGCEVITAIDGFDALAKIADNHPRIIFVDIMMPRLDGYQTCALIKNNRAFK
STPVIMLSSKDGLFDKAKGRIVGSDQFLTKPFSKEELLSAIKAHVPGFVAAEQHIS

Nucleotide


Download         Length: 411 bp        

>NTDB_id=304239 PLA107_RS30455 WP_002551738.1 5350489..5350899(-) (pilG) [Pseudomonas amygdali pv. lachrymans str. M301315]
ATGGAACAACACGCCTCCGCCTTGAAAGTCATGGTCATCGATGACTCGAAGACCATTCGCCGCACCGCCGAAACACTGCT
TAAAAACGCAGGTTGTGAAGTCATCACTGCGATAGACGGTTTCGACGCGCTGGCCAAGATTGCCGATAACCACCCACGAA
TCATATTCGTAGATATCATGATGCCGCGTCTGGACGGTTATCAGACGTGTGCGCTGATCAAGAACAACCGCGCATTCAAG
TCCACGCCGGTCATCATGCTGTCCTCCAAGGACGGTCTGTTCGACAAGGCCAAGGGGCGGATTGTCGGTTCCGATCAGTT
TTTGACAAAGCCTTTCAGCAAGGAAGAACTGCTCAGCGCGATCAAGGCTCATGTGCCGGGCTTCGTCGCAGCAGAACAAC
ACATATCATGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75.2

91.912

0.691

Multiple sequence alignment