Detailed information NTG0303807

Bioinformatically predicted

Overview

• Name: pilV
• Type: Machinery gene
• Locus tag: DVJ83_RS05075
• Genome accession: NZ_CP031158
• Coordinates: 1030254..1030757 (+)
• Length: 167 a.a.
• NCBI ID: WP_114671622.1
• Uniprot ID: A0A345IG16
• Organism: Deinococcus wulumuqiensis strain NEB 479
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1025254..1035757

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DVJ83_RS05060 (DVJ83_05060)	-	1025767..1026522 (-)	756	WP_162865400.1	DUF4388 domain-containing protein	-
DVJ83_RS05065 (DVJ83_05065)	-	1026710..1027933 (-)	1224	WP_114671211.1	transposase	-
DVJ83_RS05070 (DVJ83_05070)	-	1028317..1030257 (+)	1941	WP_162865401.1	DUF4900 domain-containing protein	-
DVJ83_RS05075 (DVJ83_05075)	pilV	1030254..1030757 (+)	504	WP_114671622.1	prepilin-type N-terminal cleavage/methylation domain-containing protein	Machinery gene
DVJ83_RS05080 (DVJ83_05080)	-	1030754..1031296 (+)	543	WP_114671623.1	prepilin-type N-terminal cleavage/methylation domain-containing protein	-
DVJ83_RS05085 (DVJ83_05085)	-	1031293..1032162 (+)	870	WP_114671624.1	prepilin-type N-terminal cleavage/methylation domain-containing protein	-
DVJ83_RS05090 (DVJ83_05090)	-	1032318..1034015 (+)	1698	WP_114671625.1	dynamin family protein	-
DVJ83_RS05095 (DVJ83_05095)	-	1034104..1035021 (+)	918	WP_114671626.1	cation diffusion facilitator family transporter	-

Sequence

Protein

• Length: 167 a.a.
• Molecular weight: 17568.18 Da
• Isoelectric Point: 10.3387

>NTDB_id=303807 DVJ83_RS05075 WP_114671622.1 1030254..1030757(+) (pilV) [Deinococcus wulumuqiensis strain NEB 479]
MTRQQGLTLLEILLIITIIGIMLALFGLSYVRSIRSAELREAAAQVATDLRRARSQVQRSSTNITLSWTPDSEGRVSAYT
VGTDPARSLPNGVTLKCVSGCTAPAGAPAGTNYNSITYTAPYGELATQNGAINGKRFVLSSPATGITPLEVRVVGVTGKV
ILTRGTS

Nucleotide

• Length: 504 bp

>NTDB_id=303807 DVJ83_RS05075 WP_114671622.1 1030254..1030757(+) (pilV) [Deinococcus wulumuqiensis strain NEB 479]
ATGACGCGGCAGCAAGGCCTTACCCTCCTCGAAATCCTCCTGATCATCACCATCATCGGTATCATGCTGGCTCTGTTCGG
ACTGTCCTATGTGCGCAGCATCCGCTCGGCAGAACTGCGGGAAGCCGCCGCCCAGGTCGCCACCGACCTTCGCCGGGCAC
GCTCGCAGGTGCAGCGCAGCAGCACCAACATCACCCTCAGCTGGACGCCTGACAGCGAGGGCCGCGTGAGCGCCTACACC
GTCGGGACGGATCCTGCCCGCTCACTTCCCAACGGCGTCACCCTGAAGTGCGTGTCCGGCTGCACGGCGCCCGCCGGTGC
CCCCGCCGGCACGAATTACAACAGCATCACCTATACGGCCCCCTACGGAGAACTCGCCACGCAAAACGGCGCCATCAACG
GCAAGAGGTTCGTGTTGAGCAGTCCGGCGACCGGCATCACGCCCCTTGAAGTTCGGGTGGTCGGCGTGACCGGCAAGGTG
ATCCTGACCCGGGGGACGTCGTGA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (1-25)

3D structure

• AlphaFold DB: A0A345IG16

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilV	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	51.829	98.204	0.509