Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   DVB73_RS14660 Genome accession   NZ_CP031146
Coordinates   3182101..3182502 (-) Length   133 a.a.
NCBI ID   WP_016395337.1    Uniprot ID   A0AAD0QXY3
Organism   Pseudomonas plecoglossicida strain XSDHY-P     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3177101..3187502
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DVB73_RS14645 (DVB73_14640) - 3179066..3181090 (-) 2025 WP_244212840.1 methyl-accepting chemotaxis protein -
  DVB73_RS14650 (DVB73_14645) - 3181138..3181692 (-) 555 WP_008094837.1 chemotaxis protein CheW -
  DVB73_RS14655 (DVB73_14650) pilH 3181689..3182054 (-) 366 WP_016395336.1 twitching motility response regulator PilH -
  DVB73_RS14660 (DVB73_14655) pilG 3182101..3182502 (-) 402 WP_016395337.1 response regulator Regulator
  DVB73_RS14665 (DVB73_14660) gshB 3182744..3183697 (+) 954 WP_016395338.1 glutathione synthase -
  DVB73_RS14670 (DVB73_14665) - 3183789..3184691 (+) 903 WP_016395339.1 energy transducer TonB -
  DVB73_RS14675 (DVB73_14670) - 3185041..3185610 (+) 570 WP_016395340.1 YqgE/AlgH family protein -
  DVB73_RS14680 (DVB73_14675) ruvX 3185610..3186035 (+) 426 WP_016395341.1 Holliday junction resolvase RuvX -
  DVB73_RS14685 (DVB73_14680) pyrR 3186081..3186599 (+) 519 WP_016395342.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14682.94 Da        Isoelectric Point: 6.3252

>NTDB_id=303763 DVB73_RS14660 WP_016395337.1 3182101..3182502(-) (pilG) [Pseudomonas plecoglossicida strain XSDHY-P]
MEQPLKVMVIDDSRTIRRTAQMLLGEAGCEVITASDGFDALAKIVDHQPQIIFVDVLMPRLDGYQTCAVIKHNSAFKDIP
VILLSSRDGLFDKARGRVVGSDQFLTKPFSKDELLDAIRAHVPGFAAHEQHAP

Nucleotide


Download         Length: 402 bp        

>NTDB_id=303763 DVB73_RS14660 WP_016395337.1 3182101..3182502(-) (pilG) [Pseudomonas plecoglossicida strain XSDHY-P]
ATGGAACAACCCCTGAAGGTGATGGTGATCGACGACTCGCGCACGATCCGCCGCACCGCGCAGATGTTGCTCGGCGAAGC
GGGCTGCGAGGTGATCACCGCCAGTGACGGTTTCGATGCCCTGGCCAAGATCGTCGACCACCAGCCGCAGATCATTTTCG
TCGATGTGCTGATGCCGCGCCTGGACGGTTACCAGACCTGCGCCGTGATCAAGCACAACAGCGCCTTCAAGGACATTCCC
GTGATTCTCCTGTCATCACGCGACGGCCTGTTCGACAAGGCCCGCGGCCGGGTGGTCGGCTCCGACCAGTTCCTGACCAA
GCCCTTCAGCAAGGACGAACTGCTCGACGCGATCAGGGCCCATGTGCCCGGTTTCGCCGCGCATGAACAACACGCACCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(7-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

71.667

90.226

0.647

Multiple sequence alignment