Detailed information    

insolico Bioinformatically predicted

Overview

Name   irvR   Type   Regulator
Locus tag   ETT44_RS04305 Genome accession   NZ_CP035455
Coordinates   809898..810686 (-) Length   262 a.a.
NCBI ID   WP_021340822.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emm197     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 804898..815686
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT44_RS04290 (ETT44_04290) - 807392..808012 (-) 621 WP_002989605.1 DUF3862 domain-containing protein -
  ETT44_RS04295 (ETT44_04295) - 808375..809463 (-) 1089 WP_023079773.1 site-specific integrase -
  ETT44_RS04300 (ETT44_04300) - 809583..809888 (-) 306 WP_011106738.1 membrane protein -
  ETT44_RS04305 (ETT44_04305) irvR 809898..810686 (-) 789 WP_021340822.1 S24 family peptidase Regulator
  ETT44_RS04310 (ETT44_04310) - 811059..811217 (+) 159 WP_136022037.1 hypothetical protein -
  ETT44_RS04315 (ETT44_04315) - 811351..812136 (-) 786 WP_136022036.1 hypothetical protein -
  ETT44_RS09290 - 812193..812339 (+) 147 WP_021340823.1 hypothetical protein -
  ETT44_RS04320 (ETT44_04320) - 812336..812818 (-) 483 WP_023605145.1 hypothetical protein -
  ETT44_RS04325 (ETT44_04325) - 812892..813131 (+) 240 WP_021340169.1 helix-turn-helix transcriptional regulator -
  ETT44_RS04335 (ETT44_04335) - 813347..813556 (-) 210 WP_002984292.1 hypothetical protein -
  ETT44_RS04340 (ETT44_04340) - 813732..813950 (-) 219 WP_023079659.1 hypothetical protein -
  ETT44_RS04345 (ETT44_04345) - 814093..814269 (+) 177 WP_002995990.1 helix-turn-helix domain-containing protein -
  ETT44_RS04350 (ETT44_04350) - 814347..814643 (+) 297 WP_011017882.1 MerR family transcriptional regulator -
  ETT44_RS04355 (ETT44_04355) - 814640..814777 (+) 138 WP_002984309.1 hypothetical protein -
  ETT44_RS04360 (ETT44_04360) - 814858..815187 (+) 330 WP_002984312.1 hypothetical protein -
  ETT44_RS04365 (ETT44_04365) - 815187..815381 (+) 195 WP_002984315.1 hypothetical protein -
  ETT44_RS04370 (ETT44_04370) - 815378..815662 (+) 285 WP_002984318.1 hypothetical protein -

Sequence

Protein


Download         Length: 262 a.a.        Molecular weight: 29992.22 Da        Isoelectric Point: 9.0535

>NTDB_id=303567 ETT44_RS04305 WP_021340822.1 809898..810686(-) (irvR) [Streptococcus pyogenes strain emm197]
MARGRGKLTPQDEEYKKIISAKINSLLLENNLKQGHLADALEIPRSSFNEYVKGNSLPNPGNVQKIADYFGLMKSDIDPR
FAPRKKNHELKIPTSPLVKKITTTVVELKVPRKQKVLDFATEQLKEQKNKITSIEKKLYEYKVYEKLSAGTGYGYFGDGN
YDTVFYDEELDYDFASWVFGDSMEPTYLNGEVVLIKQTGFDYEGGIYAVEWDGQTYIKKVYREKGGLRLVSLNKKYNDKF
APFSEGPRIIGEIVGNFMPKEY

Nucleotide


Download         Length: 789 bp        

>NTDB_id=303567 ETT44_RS04305 WP_021340822.1 809898..810686(-) (irvR) [Streptococcus pyogenes strain emm197]
ATGGCAAGAGGACGAGGGAAATTAACACCTCAAGACGAGGAATACAAAAAGATAATTTCTGCTAAAATTAACAGTTTATT
GCTAGAAAACAATTTAAAACAAGGACATTTAGCTGATGCATTGGAAATTCCACGAAGTAGTTTTAATGAATATGTCAAAG
GAAATTCCTTACCTAATCCTGGTAACGTTCAAAAGATAGCTGATTATTTCGGGTTAATGAAGTCTGATATAGATCCTAGA
TTTGCACCTCGTAAGAAAAATCACGAACTCAAAATCCCTACTTCTCCACTCGTCAAAAAAATAACCACAACAGTTGTAGA
ATTAAAGGTTCCTCGTAAACAAAAAGTTTTAGACTTTGCAACAGAACAATTGAAAGAGCAAAAAAACAAAATTACTTCGA
TAGAGAAAAAACTATATGAATACAAAGTCTATGAGAAACTTTCCGCAGGTACAGGTTATGGATATTTTGGTGATGGGAAC
TATGATACTGTTTTTTACGACGAAGAATTAGATTACGATTTTGCCTCTTGGGTTTTTGGTGATTCTATGGAACCAACTTA
TCTGAATGGTGAGGTTGTGCTTATAAAACAAACTGGCTTTGATTATGAAGGTGGCATCTATGCCGTAGAGTGGGACGGAC
AAACCTATATTAAGAAAGTTTACAGAGAAAAGGGTGGCTTGCGCCTTGTGTCCTTAAATAAAAAATACAATGACAAGTTT
GCTCCTTTTAGTGAAGGCCCTCGTATAATAGGGGAAATTGTCGGTAACTTTATGCCTAAAGAGTACTGA

Domains

Predicted by InterProScan.

Peptidase S24-like (Peptidase_S24)

(168-254)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  irvR Streptococcus mutans UA159

38.158

100

0.443

Multiple sequence alignment