Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | BLDA23_RS19415 | Genome accession | NZ_CP031126 |
| Coordinates | 3675130..3675414 (-) | Length | 94 a.a. |
| NCBI ID | WP_003185421.1 | Uniprot ID | A0A1Y0XQV9 |
| Organism | Bacillus licheniformis strain 0DA23-1 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
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Genomic Context
Location: 3670130..3680414
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BLDA23_RS19395 (BLDA23_19395) | smpB | 3670940..3671413 (-) | 474 | WP_009329604.1 | SsrA-binding protein SmpB | - |
| BLDA23_RS19400 (BLDA23_19400) | rnr | 3671525..3673828 (-) | 2304 | WP_003185414.1 | ribonuclease R | - |
| BLDA23_RS19405 (BLDA23_19405) | - | 3673842..3674588 (-) | 747 | WP_003185416.1 | carboxylesterase | - |
| BLDA23_RS19410 (BLDA23_19410) | secG | 3674729..3674959 (-) | 231 | WP_003185418.1 | preprotein translocase subunit SecG | - |
| BLDA23_RS19415 (BLDA23_19415) | abrB | 3675130..3675414 (-) | 285 | WP_003185421.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Regulator |
| BLDA23_RS19420 (BLDA23_19420) | - | 3675443..3675676 (-) | 234 | WP_085959538.1 | helix-turn-helix transcriptional regulator | - |
| BLDA23_RS19425 (BLDA23_19425) | - | 3675829..3676230 (+) | 402 | WP_009329609.1 | transcriptional regulator | - |
| BLDA23_RS19430 (BLDA23_19430) | - | 3676400..3676798 (+) | 399 | WP_009329610.1 | helix-turn-helix transcriptional regulator | - |
| BLDA23_RS19435 (BLDA23_19435) | - | 3676846..3677523 (-) | 678 | WP_003185432.1 | ABC transporter permease | - |
| BLDA23_RS19440 (BLDA23_19440) | opuCC | 3677540..3678457 (-) | 918 | WP_080627039.1 | osmoprotectant ABC transporter substrate-binding lipoprotein OpuCC | - |
| BLDA23_RS19445 (BLDA23_19445) | - | 3678471..3679124 (-) | 654 | WP_009329612.1 | ABC transporter permease | - |
| BLDA23_RS19450 (BLDA23_19450) | - | 3679146..3680285 (-) | 1140 | WP_003185439.1 | betaine/proline/choline family ABC transporter ATP-binding protein | - |
Sequence
Protein
Download Length: 94 a.a. Molecular weight: 10486.36 Da Isoelectric Point: 7.9620
>NTDB_id=303565 BLDA23_RS19415 WP_003185421.1 3675130..3675414(-) (abrB) [Bacillus licheniformis strain 0DA23-1]
MKNTGIVRRIDELGRVVLPVEMRRVLNINEKDPLEIYTDGENIILTKYAANMACLMTGDITTKNKTYAGGKIVLSPRGAE
MLLEDMMAALSEKK
MKNTGIVRRIDELGRVVLPVEMRRVLNINEKDPLEIYTDGENIILTKYAANMACLMTGDITTKNKTYAGGKIVLSPRGAE
MLLEDMMAALSEKK
Nucleotide
Download Length: 285 bp
>NTDB_id=303565 BLDA23_RS19415 WP_003185421.1 3675130..3675414(-) (abrB) [Bacillus licheniformis strain 0DA23-1]
GTGAAAAATACCGGGATTGTCCGGAGAATCGATGAGCTCGGCAGAGTCGTTCTCCCGGTCGAAATGCGCAGGGTGCTGAA
TATCAATGAAAAGGACCCGCTCGAAATATATACCGACGGCGAAAACATCATTTTGACAAAATACGCCGCAAACATGGCAT
GTTTGATGACCGGCGACATCACCACGAAAAATAAAACGTATGCGGGCGGCAAAATCGTACTCAGCCCGCGCGGAGCGGAA
ATGCTCCTGGAAGATATGATGGCGGCACTGTCAGAAAAGAAATAA
GTGAAAAATACCGGGATTGTCCGGAGAATCGATGAGCTCGGCAGAGTCGTTCTCCCGGTCGAAATGCGCAGGGTGCTGAA
TATCAATGAAAAGGACCCGCTCGAAATATATACCGACGGCGAAAACATCATTTTGACAAAATACGCCGCAAACATGGCAT
GTTTGATGACCGGCGACATCACCACGAAAAATAAAACGTATGCGGGCGGCAAAATCGTACTCAGCCCGCGCGGAGCGGAA
ATGCTCCTGGAAGATATGATGGCGGCACTGTCAGAAAAGAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
56.044 |
96.809 |
0.543 |