Detailed information    

insolico Bioinformatically predicted

Overview


Name   rok   Type   Regulator
Locus tag   BLDA23_RS10705 Genome accession   NZ_CP031126
Coordinates   2053324..2053527 (+) Length   67 a.a.
NCBI ID   WP_003182112.1    Uniprot ID   A0A5Q3BNZ5
Organism   Bacillus licheniformis strain 0DA23-1     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context


Location: 2048324..2058527
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BLDA23_RS10665 (BLDA23_10665) - 2048340..2048852 (+) 513 WP_080626917.1 Fur family transcriptional regulator -
  BLDA23_RS10670 (BLDA23_10670) - 2048849..2049514 (+) 666 WP_009328436.1 GntR family transcriptional regulator -
  BLDA23_RS10675 (BLDA23_10675) - 2049522..2050490 (+) 969 WP_011197999.1 multidrug resistance efflux transporter family protein -
  BLDA23_RS10680 (BLDA23_10680) - 2050545..2051306 (-) 762 WP_003182101.1 N-acetylmuramoyl-L-alanine amidase -
  BLDA23_RS10690 (BLDA23_10690) - 2051839..2052321 (-) 483 WP_003182102.1 DMT family transporter -
  BLDA23_RS10695 (BLDA23_10695) - 2052344..2052796 (-) 453 WP_080626918.1 DMT family transporter -
  BLDA23_RS10705 (BLDA23_10705) rok 2053324..2053527 (+) 204 WP_003182112.1 hypothetical protein Regulator
  BLDA23_RS10710 (BLDA23_10710) - 2053741..2054364 (+) 624 WP_009328434.1 TetR/AcrR family transcriptional regulator -
  BLDA23_RS10715 (BLDA23_10715) - 2054367..2054753 (+) 387 WP_009328433.1 OsmC family protein -
  BLDA23_RS10720 (BLDA23_10720) - 2054786..2056135 (+) 1350 WP_080623907.1 cytosine permease -
  BLDA23_RS10725 (BLDA23_10725) - 2056160..2058265 (+) 2106 WP_003182119.1 hydantoinase/oxoprolinase family protein -

Sequence


Protein


Download         Length: 67 a.a.        Molecular weight: 8116.34 Da        Isoelectric Point: 9.8619

>NTDB_id=303539 BLDA23_RS10705 WP_003182112.1 2053324..2053527(+) (rok) [Bacillus licheniformis strain 0DA23-1]
MFNEREALRLRLEQLNNAEIQIIRELQSERKDIYSRLRELDRQKVSSSHHKKTLLELVDETVNLLKK

Nucleotide


Download         Length: 204 bp        

>NTDB_id=303539 BLDA23_RS10705 WP_003182112.1 2053324..2053527(+) (rok) [Bacillus licheniformis strain 0DA23-1]
GTGTTCAACGAAAGAGAGGCGCTCCGATTAAGACTGGAGCAACTGAACAATGCCGAGATTCAGATCATACGCGAACTCCA
AAGTGAGCGGAAAGACATTTATTCCAGGCTGCGGGAATTAGATCGTCAAAAAGTTTCTTCATCACATCATAAAAAAACTT
TATTAGAGTTAGTCGATGAAACTGTAAATCTCTTGAAAAAATAG

Domains



No domain identified.



Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A5Q3BNZ5

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

70.213

70.149

0.493


Multiple sequence alignment