Detailed information    

insolico Bioinformatically predicted

Overview

Name   recO   Type   Machinery gene
Locus tag   ETT44_RS00255 Genome accession   NZ_CP035455
Coordinates   33538..34293 (+) Length   251 a.a.
NCBI ID   WP_002986719.1    Uniprot ID   A2RBY9
Organism   Streptococcus pyogenes strain emm197     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 28538..39293
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT44_RS09575 (ETT44_00240) - 29913..30194 (-) 282 WP_109821002.1 transposase -
  ETT44_RS00245 (ETT44_00245) pcsB 30941..32137 (+) 1197 WP_020833179.1 peptidoglycan hydrolase PcsB -
  ETT44_RS00250 (ETT44_00250) - 32390..33352 (+) 963 WP_002986722.1 ribose-phosphate diphosphokinase -
  ETT44_RS00255 (ETT44_00255) recO 33538..34293 (+) 756 WP_002986719.1 DNA repair protein RecO Machinery gene
  ETT44_RS00260 (ETT44_00260) plsX 34396..35403 (+) 1008 WP_136022043.1 phosphate acyltransferase PlsX -
  ETT44_RS00265 (ETT44_00265) - 35456..35638 (+) 183 WP_247580028.1 phosphopantetheine-binding protein -
  ETT44_RS00270 (ETT44_00270) purC 35789..36493 (+) 705 WP_014635213.1 phosphoribosylaminoimidazolesuccinocarboxamide synthase -

Sequence

Protein


Download         Length: 251 a.a.        Molecular weight: 29516.97 Da        Isoelectric Point: 6.9077

>NTDB_id=303512 ETT44_RS00255 WP_002986719.1 33538..34293(+) (recO) [Streptococcus pyogenes strain emm197]
MQLTESLGIVLFNRNYREDDKLVKIFTEVAGKQMFFVKHISRSKMSSIIQPLTIADFIFKLNDTGLSYVVDYSNVNTYRY
INNDIFRLAYASYVLALADAAIADNESDSHLFTFLKKTLDLMEEGLDYEILTNIFEIQILDRFGISLNFHECAICHRTDL
PLDFSHRFSAVLCSEHYYKDNRRNHLDPNVIYLLSRFQKITFDDLRTISLNKDIKKKLRQFIDELYHDYVGIKLKSKTFI
DNLVKWGDIMK

Nucleotide


Download         Length: 756 bp        

>NTDB_id=303512 ETT44_RS00255 WP_002986719.1 33538..34293(+) (recO) [Streptococcus pyogenes strain emm197]
ATGCAACTAACAGAATCACTAGGCATTGTTCTTTTTAATAGGAATTATCGAGAAGATGATAAATTAGTCAAAATATTTAC
TGAAGTAGCAGGTAAGCAGATGTTTTTCGTGAAACATATTAGTCGTTCCAAAATGTCCTCAATCATTCAACCACTAACGA
TTGCTGATTTTATTTTCAAGTTAAATGATACAGGCTTGTCTTATGTTGTTGACTATAGTAACGTTAACACTTATCGGTAT
ATTAATAATGATATTTTTCGATTAGCCTATGCTAGTTATGTCTTAGCATTAGCTGATGCTGCGATTGCAGATAATGAATC
AGATTCGCATTTGTTTACGTTTTTGAAAAAAACACTTGATTTGATGGAAGAGGGCCTAGATTATGAAATTTTGACAAATA
TTTTTGAAATTCAGATATTAGATCGTTTTGGTATTAGTCTAAACTTTCATGAGTGTGCCATTTGTCATCGCACTGATTTA
CCGCTTGATTTTTCCCATCGTTTTTCAGCTGTACTTTGTTCTGAACATTATTACAAAGACAACCGACGTAATCATTTAGA
TCCAAATGTTATCTACTTGTTGAGTCGATTTCAAAAAATCACATTTGATGATTTGAGAACTATTTCATTGAATAAAGACA
TCAAAAAGAAGCTTCGTCAGTTCATTGATGAGTTGTATCACGACTATGTAGGAATCAAATTAAAAAGTAAAACATTCATT
GATAATTTAGTTAAGTGGGGAGATATTATGAAATGA

Domains

Predicted by InterProScan.

Recombination protein O C terminal (RecO_C)

(83-237)

Recombination protein O N terminal (RecO_N)

(1-73)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A2RBY9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recO Streptococcus pneumoniae R6

60.159

100

0.602

Multiple sequence alignment