Detailed information NTG0303442

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: DVA63_RS16485
• Genome accession: NZ_CP031113
• Coordinates: 3461912..3463015 (+)
• Length: 367 a.a.
• NCBI ID: WP_023853086.1
• Uniprot ID: A0AAI9J0F0
• Organism: Bordetella pertussis strain UK39
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3456912..3468015

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DVA63_RS16460 (DVA63_16595)	-	3458789..3459175 (+)	387	WP_003808567.1	MOSC N-terminal beta barrel domain-containing protein	-
DVA63_RS16465 (DVA63_16600)	-	3459183..3460316 (-)	1134	WP_010931494.1	benzoate/H(+) symporter BenE family transporter	-
DVA63_RS16470 (DVA63_16605)	-	3460380..3460631 (-)	252	WP_003808570.1	YfhL family 4Fe-4S dicluster ferredoxin	-
DVA63_RS16475 (DVA63_16610)	coaD	3460686..3461195 (-)	510	WP_003808574.1	pantetheine-phosphate adenylyltransferase	-
DVA63_RS16480 (DVA63_16615)	rsmD	3461216..3461836 (-)	621	WP_003808577.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
DVA63_RS16485 (DVA63_16620)	pilA	3461912..3463015 (+)	1104	WP_023853086.1	signal recognition particle-docking protein FtsY	Machinery gene
DVA63_RS16490 (DVA63_16625)	-	3463062..3464660 (-)	1599	Protein_3261	CYTH and CHAD domain-containing protein	-
DVA63_RS16495 (DVA63_16630)	phnE	3464833..3465654 (-)	822	WP_010931496.1	phosphonate ABC transporter, permease protein PhnE	-
DVA63_RS16500 (DVA63_16635)	phnE	3465651..3466541 (-)	891	WP_033446133.1	phosphonate ABC transporter, permease protein PhnE	-
DVA63_RS16505 (DVA63_16640)	-	3466538..3467023 (-)	486	Protein_3264	ATP-binding cassette domain-containing protein	-
DVA63_RS16510 (DVA63_16645)	-	3467017..3467967 (-)	951	WP_005013747.1	IS481-like element IS481 family transposase	-

Sequence

Protein

• Length: 367 a.a.
• Molecular weight: 38499.02 Da
• Isoelectric Point: 6.5148

>NTDB_id=303442 DVA63_RS16485 WP_023853086.1 3461912..3463015(+) (pilA) [Bordetella pertussis strain UK39]
MFSFFKKKSPPPAAPAQPAPPPEAVDAGSAAPAQPQPAEPQPEPQPQQPPEPQPPVAAAPEAPRKASWLSRLKQGLSRTG
QNIGGLFVGVKVDENLFEELESALIMADAGIEATEKLLAALRARVKKERIDDPAQVKTALRQLLADHLRPLERSFDLGRA
QPLVVMIAGVNGAGKTTSIGKLAHTFQRQGASVLLAAGDTFRAAAREQLVEWGSRNNVTVISQDGGDPAAVAFDSVNAGR
ARNVGVVMVDTAGRLPTQLHLMEELKKIRRVIGKAEASAPHEVLLVVDGNTGQNALAQIRAFDAAITLTGLVVTKLDGTA
KGGTLAAVAAGSQGVRPIPVYWIGVGEGLEDLQPFVADEFAAALLAD

Nucleotide

• Length: 1104 bp

>NTDB_id=303442 DVA63_RS16485 WP_023853086.1 3461912..3463015(+) (pilA) [Bordetella pertussis strain UK39]
ATGTTCAGCTTCTTCAAGAAAAAATCCCCTCCGCCCGCCGCGCCGGCCCAGCCCGCGCCGCCGCCGGAGGCAGTGGACGC
AGGGTCAGCCGCACCTGCGCAGCCTCAACCCGCCGAGCCGCAGCCCGAGCCGCAGCCGCAACAACCGCCCGAGCCGCAGC
CACCGGTCGCGGCCGCGCCCGAGGCGCCCCGCAAGGCCTCGTGGCTGAGCCGGCTCAAACAGGGCCTGTCGCGCACCGGC
CAGAACATCGGCGGGCTGTTCGTCGGCGTGAAGGTCGACGAGAACCTGTTCGAGGAACTGGAGTCGGCGCTGATCATGGC
CGACGCGGGCATCGAGGCCACCGAGAAACTGCTGGCCGCGCTGCGCGCGCGCGTCAAGAAAGAGCGCATCGACGATCCGG
CGCAGGTCAAGACGGCGCTGCGCCAATTGCTGGCCGACCATCTGCGGCCGCTGGAGCGGTCCTTCGACCTGGGGCGGGCC
CAGCCCCTGGTGGTCATGATCGCCGGCGTCAACGGCGCGGGCAAGACGACCTCGATCGGCAAGCTGGCGCATACCTTCCA
GCGCCAGGGCGCCAGCGTGCTGCTGGCGGCCGGGGACACCTTCCGCGCGGCGGCGCGCGAGCAATTGGTCGAATGGGGCA
GCCGCAACAATGTGACCGTGATCTCGCAGGATGGCGGCGATCCGGCCGCGGTGGCGTTCGACTCGGTCAATGCCGGACGT
GCGCGCAACGTGGGCGTGGTGATGGTGGATACGGCCGGCCGCCTGCCCACGCAGCTGCACCTGATGGAAGAATTGAAGAA
GATCCGCCGCGTCATCGGCAAGGCCGAGGCCAGCGCGCCGCATGAAGTGCTGCTGGTGGTCGATGGCAACACCGGCCAGA
ACGCGCTGGCGCAAATCCGCGCCTTCGACGCCGCCATCACCCTCACCGGCCTGGTCGTCACCAAGCTGGACGGCACCGCC
AAGGGCGGCACGCTGGCGGCCGTGGCCGCCGGCAGCCAGGGCGTGCGGCCCATCCCGGTCTATTGGATCGGCGTGGGCGA
GGGGTTGGAGGACCTGCAGCCCTTCGTGGCCGACGAGTTCGCCGCCGCCCTGCTGGCCGACTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (163-365)

• SRP54-type protein, helical bundle domain (SRP54_N) (83-142)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	53.913	94.005	0.507