Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   DN409_RS06015 Genome accession   NZ_CP031071
Coordinates   1164616..1164792 (+) Length   58 a.a.
NCBI ID   WP_002011319.1    Uniprot ID   A0A366GET8
Organism   Bacillus mycoides strain BPN401     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1159616..1169792
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DN409_RS05995 (DN409_05990) clpB 1159943..1162543 (+) 2601 WP_061675299.1 ATP-dependent chaperone ClpB -
  DN409_RS06000 (DN409_05995) - 1162577..1162759 (-) 183 WP_001211111.1 YjzD family protein -
  DN409_RS06005 (DN409_06000) - 1162915..1163649 (+) 735 WP_002030268.1 hydrolase -
  DN409_RS06010 (DN409_06005) - 1163679..1164551 (+) 873 WP_002086991.1 NAD(P)-dependent oxidoreductase -
  DN409_RS06015 (DN409_06010) comZ 1164616..1164792 (+) 177 WP_002011319.1 ComZ family protein Regulator
  DN409_RS06020 (DN409_06015) fabH 1165229..1166161 (+) 933 WP_061688963.1 beta-ketoacyl-ACP synthase III -
  DN409_RS06025 (DN409_06020) fabF 1166193..1167431 (+) 1239 WP_061688962.1 beta-ketoacyl-ACP synthase II -
  DN409_RS06030 (DN409_06025) - 1167547..1168338 (+) 792 WP_002030365.1 DUF2268 domain-containing protein -
  DN409_RS06035 (DN409_06030) - 1168480..1169226 (+) 747 WP_002030367.1 YjbA family protein -

Sequence

Protein


Download         Length: 58 a.a.        Molecular weight: 6491.67 Da        Isoelectric Point: 4.6653

>NTDB_id=303202 DN409_RS06015 WP_002011319.1 1164616..1164792(+) (comZ) [Bacillus mycoides strain BPN401]
MNEKSMQFLQIAMKHLPEAKAILDSNGIALDMEKAQPVLELLMKVMGEAYELGKADKE

Nucleotide


Download         Length: 177 bp        

>NTDB_id=303202 DN409_RS06015 WP_002011319.1 1164616..1164792(+) (comZ) [Bacillus mycoides strain BPN401]
ATGAACGAAAAAAGTATGCAATTTTTACAAATCGCAATGAAGCATTTACCAGAAGCAAAGGCAATTTTAGATTCTAATGG
AATTGCACTTGATATGGAGAAAGCACAGCCGGTGTTAGAGCTATTGATGAAAGTAATGGGCGAAGCATATGAGCTTGGGA
AAGCAGATAAAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A366GET8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

61.818

94.828

0.586

Multiple sequence alignment