Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   DN407_RS05885 Genome accession   NZ_CP031068
Coordinates   1132252..1132428 (+) Length   58 a.a.
NCBI ID   WP_001986215.1    Uniprot ID   A0A9W5QJV7
Organism   Bacillus sp. JAS24-2     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1127252..1137428
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DN407_RS05865 (DN407_05860) clpC 1127583..1130183 (+) 2601 WP_000365404.1 ATP-dependent chaperone ClpB Regulator
  DN407_RS05870 (DN407_05865) - 1130222..1130404 (-) 183 WP_001211116.1 YjzD family protein -
  DN407_RS05875 (DN407_05870) - 1130561..1131295 (+) 735 WP_000028691.1 hydrolase -
  DN407_RS05880 (DN407_05875) - 1131325..1132197 (+) 873 WP_002102826.1 NAD(P)-dependent oxidoreductase -
  DN407_RS05885 (DN407_05880) comZ 1132252..1132428 (+) 177 WP_001986215.1 ComZ family protein Regulator
  DN407_RS05890 (DN407_05885) fabH 1132966..1133898 (+) 933 WP_001100532.1 beta-ketoacyl-ACP synthase III -
  DN407_RS05895 (DN407_05890) fabF 1133930..1135168 (+) 1239 WP_000412656.1 beta-ketoacyl-ACP synthase II -
  DN407_RS05900 (DN407_05895) - 1135275..1136063 (+) 789 WP_000513275.1 DUF2268 domain-containing putative Zn-dependent protease -
  DN407_RS05905 (DN407_05900) - 1136207..1136953 (+) 747 WP_000966128.1 YjbA family protein -

Sequence

Protein


Download         Length: 58 a.a.        Molecular weight: 6576.74 Da        Isoelectric Point: 4.4797

>NTDB_id=303152 DN407_RS05885 WP_001986215.1 1132252..1132428(+) (comZ) [Bacillus sp. JAS24-2]
MNEKSMQFLQIAMKHLPEAKAILDDNGIALDMEKAQPVLELLMKVMNEAYELGKADKE

Nucleotide


Download         Length: 177 bp        

>NTDB_id=303152 DN407_RS05885 WP_001986215.1 1132252..1132428(+) (comZ) [Bacillus sp. JAS24-2]
ATGAACGAAAAAAGCATGCAGTTTTTACAAATCGCAATGAAGCATTTACCGGAAGCAAAGGCAATTTTAGATGATAATGG
AATTGCACTTGATATGGAGAAGGCACAGCCGGTGTTAGAGTTGTTAATGAAAGTTATGAACGAGGCTTATGAGCTCGGGA
AAGCAGATAAAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

61.818

94.828

0.586

Multiple sequence alignment