Detailed information    

insolico Bioinformatically predicted

Overview


Name   mecA   Type   Regulator
Locus tag   DN405_RS05975 Genome accession   NZ_CP031065
Coordinates   1141715..1142398 (+) Length   227 a.a.
NCBI ID   WP_000350713.1    Uniprot ID   A0A9W5RA28
Organism   Bacillus sp. SH8-8     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context


Location: 1136715..1147398
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DN405_RS05955 (DN405_05930) - 1137776..1139422 (+) 1647 WP_000728609.1 peptide ABC transporter substrate-binding protein -
  DN405_RS05960 (DN405_05935) - 1139453..1139656 (-) 204 WP_000559972.1 hypothetical protein -
  DN405_RS05965 (DN405_05940) spx 1140250..1140645 (+) 396 WP_000258267.1 transcriptional regulator Spx -
  DN405_RS05970 (DN405_05945) - 1140695..1141369 (-) 675 WP_000362607.1 TerC family protein -
  DN405_RS05975 (DN405_05950) mecA 1141715..1142398 (+) 684 WP_000350713.1 adaptor protein MecA Regulator
  DN405_RS05980 (DN405_05955) - 1142471..1144015 (+) 1545 WP_000799194.1 cardiolipin synthase -
  DN405_RS05985 (DN405_05960) - 1144096..1145340 (+) 1245 WP_000628315.1 competence protein CoiA family protein -
  DN405_RS05990 (DN405_05965) pepF 1145392..1147218 (+) 1827 WP_000003348.1 oligoendopeptidase F Regulator

Sequence


Protein


Download         Length: 227 a.a.        Molecular weight: 27010.06 Da        Isoelectric Point: 3.9822

>NTDB_id=303105 DN405_RS05975 WP_000350713.1 1141715..1142398(+) (mecA) [Bacillus sp. SH8-8]
MDIERINDHTMKFFITYIDIEDRGFNREEIWYDRERSEELFWEMMDEARDHDDFFIDGPLWIQVQAVDKGIEVLVTKAEL
SKDGQKLELPIGVDKIIDIPLDEGIESLFQQELVEEVEEQTGTNFNEDGTFGFLIKFNDFEDVISLSHRLIFEDIKDELY
SFEDRYYVYVEFDEVLHDEEEIDRILSIILEYGEESTLTIHRVSEYGKQIVKEHALETIRNNFPAKT

Nucleotide


Download         Length: 684 bp        

>NTDB_id=303105 DN405_RS05975 WP_000350713.1 1141715..1142398(+) (mecA) [Bacillus sp. SH8-8]
TTGGATATTGAAAGAATTAATGATCATACGATGAAATTTTTTATTACGTACATTGATATAGAGGATAGAGGATTTAATCG
TGAAGAAATTTGGTATGATCGCGAACGAAGTGAAGAGCTCTTTTGGGAGATGATGGACGAAGCTCGTGATCATGACGATT
TCTTTATTGATGGACCGTTATGGATTCAAGTGCAAGCAGTCGATAAAGGGATTGAAGTACTTGTCACGAAAGCAGAGCTT
TCAAAGGACGGACAAAAGCTGGAACTACCGATAGGGGTAGACAAAATTATAGATATTCCTCTAGATGAAGGCATCGAATC
ATTATTCCAACAAGAATTAGTCGAAGAGGTAGAAGAACAAACAGGAACAAACTTTAATGAAGATGGTACGTTTGGCTTTT
TAATTAAATTTAATGATTTTGAAGATGTCATTTCATTAAGTCATCGTCTTATCTTTGAAGATATAAAAGATGAGCTGTAT
TCATTTGAGGACCGCTATTATGTATATGTGGAATTCGATGAAGTGCTACATGATGAAGAAGAAATCGATCGTATTTTAAG
TATTATTTTAGAATATGGAGAAGAATCAACTTTAACAATTCATCGTGTAAGTGAGTATGGAAAACAAATTGTGAAAGAGC
ATGCGCTTGAAACGATTCGCAATAATTTTCCTGCTAAAACGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

55.702

100

0.559


Multiple sequence alignment