Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   DN405_RS05880 Genome accession   NZ_CP031065
Coordinates   1123197..1123373 (+) Length   58 a.a.
NCBI ID   WP_001986215.1    Uniprot ID   A0A9W5QJV7
Organism   Bacillus sp. SH8-8     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1118197..1128373
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DN405_RS05860 (DN405_05835) clpC 1118528..1121128 (+) 2601 WP_016122101.1 ATP-dependent chaperone ClpB Regulator
  DN405_RS05865 (DN405_05840) - 1121167..1121349 (-) 183 WP_001211116.1 YjzD family protein -
  DN405_RS05870 (DN405_05845) - 1121506..1122240 (+) 735 WP_000028691.1 hydrolase -
  DN405_RS05875 (DN405_05850) - 1122270..1123142 (+) 873 WP_006921015.1 NAD(P)-dependent oxidoreductase -
  DN405_RS05880 (DN405_05855) comZ 1123197..1123373 (+) 177 WP_001986215.1 ComZ family protein Regulator
  DN405_RS05885 (DN405_05860) fabH 1123765..1124697 (+) 933 WP_001100547.1 beta-ketoacyl-ACP synthase III -
  DN405_RS05890 (DN405_05865) fabF 1124728..1125966 (+) 1239 WP_000412656.1 beta-ketoacyl-ACP synthase II -
  DN405_RS05895 (DN405_05870) - 1126073..1126861 (+) 789 WP_049108559.1 DUF2268 domain-containing putative Zn-dependent protease -
  DN405_RS05900 (DN405_05875) - 1127004..1127750 (+) 747 WP_000966127.1 YjbA family protein -
  DN405_RS05905 (DN405_05880) - 1127773..1127955 (-) 183 WP_001233404.1 hypothetical protein -

Sequence

Protein


Download         Length: 58 a.a.        Molecular weight: 6576.74 Da        Isoelectric Point: 4.4797

>NTDB_id=303102 DN405_RS05880 WP_001986215.1 1123197..1123373(+) (comZ) [Bacillus sp. SH8-8]
MNEKSMQFLQIAMKHLPEAKAILDDNGIALDMEKAQPVLELLMKVMNEAYELGKADKE

Nucleotide


Download         Length: 177 bp        

>NTDB_id=303102 DN405_RS05880 WP_001986215.1 1123197..1123373(+) (comZ) [Bacillus sp. SH8-8]
ATGAACGAAAAAAGCATGCAGTTTTTACAAATCGCAATGAAGCATTTACCGGAAGCAAAGGCAATTTTAGATGATAATGG
AATTGCACTTGATATGGAGAAGGCACAGCCGGTGTTAGAGTTGTTAATGAAAGTTATGAACGAAGCTTATGAGCTTGGGA
AAGCAGATAAAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

61.818

94.828

0.586

Multiple sequence alignment