Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   Xcom_RS07225 Genome accession   NZ_CP031059
Coordinates   1659938..1660339 (+) Length   133 a.a.
NCBI ID   WP_005913706.1    Uniprot ID   A0AAI7ZH35
Organism   Xanthomonas axonopodis pv. commiphoreae strain LMG 26789     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 1654938..1665339
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Xcom_RS07200 (Xcom_07205) tsaB 1655637..1656356 (+) 720 WP_008575199.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -
  Xcom_RS07205 (Xcom_07210) - 1656353..1656709 (+) 357 Protein_1323 ADP-ribosylglycohydrolase family protein -
  Xcom_RS07210 (Xcom_07215) - 1656980..1657537 (+) 558 Protein_1324 ADP-ribosylglycohydrolase family protein -
  Xcom_RS07215 (Xcom_07220) - 1657879..1658754 (-) 876 WP_011348243.1 energy transducer TonB -
  Xcom_RS07220 (Xcom_07225) gshB 1658751..1659701 (-) 951 WP_122272465.1 glutathione synthase -
  Xcom_RS07225 (Xcom_07230) pilG 1659938..1660339 (+) 402 WP_005913706.1 twitching motility response regulator PilG Regulator
  Xcom_RS07230 (Xcom_07235) - 1660357..1660719 (+) 363 WP_005913708.1 response regulator -
  Xcom_RS07235 (Xcom_07240) - 1660719..1661260 (+) 542 Protein_1329 chemotaxis protein CheW -
  Xcom_RS07240 (Xcom_07245) - 1661300..1663336 (+) 2037 WP_008575181.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14667.03 Da        Isoelectric Point: 6.9539

>NTDB_id=303006 Xcom_RS07225 WP_005913706.1 1659938..1660339(+) (pilG) [Xanthomonas axonopodis pv. commiphoreae strain LMG 26789]
MSENIAAGGELAGLKVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIK
GNQLFKSTPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLSAIRTYVHA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=303006 Xcom_RS07225 WP_005913706.1 1659938..1660339(+) (pilG) [Xanthomonas axonopodis pv. commiphoreae strain LMG 26789]
ATGAGTGAAAACATTGCTGCGGGTGGGGAACTCGCAGGACTGAAGGTGATGGTGATCGATGATTCGAAAACCATTCGCCG
CACCGCCGAAACGCTGCTGAAGCGGGAAGGTTGTGAAGTAGTGACAGCAACGGATGGTTTCGAGGCACTGGCCAAAATTG
CGGACCAGCAACCTCAGATCATTTTCGTCGACATCATGATGCCGCGCCTGGATGGGTACCAGACGTGCGCGTTGATCAAG
GGCAACCAGCTCTTCAAATCGACGCCGGTGATCATGTTGTCGTCCAAGGACGGCCTGTTCGACAAGGCTCGCGGCCGCAT
CGTCGGTTCCGAGCAATATCTGACCAAGCCGTTCACCCGTGAAGAACTACTGAGCGCGATCCGCACGTACGTCCACGCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75.207

90.977

0.684

Multiple sequence alignment