Detailed information    

insolico Bioinformatically predicted

Overview


Name   irvR   Type   Regulator
Locus tag   ETT50_RS03205 Genome accession   NZ_CP035449
Coordinates   617289..618077 (-) Length   262 a.a.
NCBI ID   WP_030127591.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emm56     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 612289..623077
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT50_RS03175 (ETT50_03175) - 613005..613844 (+) 840 WP_002989125.1 DegV family protein -
  ETT50_RS03180 (ETT50_03180) - 613837..614679 (+) 843 WP_002992620.1 SGNH/GDSL hydrolase family protein -
  ETT50_RS03185 (ETT50_03185) - 614657..615244 (+) 588 WP_010922482.1 YpmS family protein -
  ETT50_RS03190 (ETT50_03190) - 615343..615618 (+) 276 WP_002983920.1 HU family DNA-binding protein -
  ETT50_RS03195 (ETT50_03195) - 615707..616849 (-) 1143 WP_032465117.1 site-specific integrase -
  ETT50_RS03200 (ETT50_03200) - 616974..617279 (-) 306 WP_011106738.1 membrane protein -
  ETT50_RS03205 (ETT50_03205) irvR 617289..618077 (-) 789 WP_030127591.1 S24 family peptidase Regulator
  ETT50_RS09390 - 618447..618596 (+) 150 WP_021340643.1 hypothetical protein -
  ETT50_RS03210 (ETT50_03210) - 618582..618797 (-) 216 WP_014635530.1 hypothetical protein -
  ETT50_RS03215 (ETT50_03215) - 618856..619014 (+) 159 WP_021340638.1 hypothetical protein -
  ETT50_RS03220 (ETT50_03220) - 619113..619754 (-) 642 WP_001008979.1 hypothetical protein -
  ETT50_RS03225 (ETT50_03225) - 619847..620086 (+) 240 WP_014411882.1 helix-turn-helix transcriptional regulator -
  ETT50_RS03230 (ETT50_03230) - 620097..620858 (+) 762 WP_023610918.1 phage antirepressor KilAC domain-containing protein -
  ETT50_RS09510 - 620871..621002 (+) 132 WP_002985401.1 hypothetical protein -
  ETT50_RS03235 (ETT50_03235) - 620999..621181 (-) 183 WP_011889039.1 hypothetical protein -
  ETT50_RS03240 (ETT50_03240) - 621287..621598 (+) 312 WP_032465116.1 hypothetical protein -
  ETT50_RS09515 - 621600..621734 (+) 135 WP_261729371.1 hypothetical protein -
  ETT50_RS03245 (ETT50_03245) - 621856..622617 (+) 762 WP_014635613.1 DnaD domain protein -

Sequence


Protein


Download         Length: 262 a.a.        Molecular weight: 30036.18 Da        Isoelectric Point: 8.1141

>NTDB_id=302979 ETT50_RS03205 WP_030127591.1 617289..618077(-) (irvR) [Streptococcus pyogenes strain emm56]
MARGRGKLTPQDEEYKKIISAKINSLLLENNLKQGHLADALEIPRSSFNEYVKGNSLPNPGNVQKIADYFGLMKSDIDPR
FAPRKKNHELKIPTSPLVKKITTTVVELNVPRKQKVLDFATEQLKEQKNKITSIEKKLYEYKVYEKLSAGTGYGYFGDGN
YDTVFYDEELDYDFASWVFGDSMEPTYLNGEVVLIKQTGFDYEGGIYAVEWDGQTYIKKVYREKDGLRLVSLNKKYNDKF
APFSEGPRIIGEIVGNFMPKEY

Nucleotide


Download         Length: 789 bp        

>NTDB_id=302979 ETT50_RS03205 WP_030127591.1 617289..618077(-) (irvR) [Streptococcus pyogenes strain emm56]
ATGGCAAGAGGACGAGGGAAATTAACACCTCAAGACGAGGAATACAAAAAGATAATTTCTGCTAAAATTAACAGTTTATT
GCTAGAAAACAATTTAAAACAAGGACATTTAGCTGATGCATTGGAAATTCCACGAAGTAGTTTTAATGAATATGTCAAAG
GAAATTCCTTACCTAATCCTGGTAACGTTCAAAAGATAGCTGATTATTTCGGGTTAATGAAGTCTGATATAGATCCTAGA
TTTGCACCTCGTAAGAAAAATCACGAACTCAAAATCCCTACTTCTCCACTTGTCAAAAAAATAACCACAACAGTCGTAGA
ATTAAATGTTCCTCGTAAGCAAAAAGTTTTAGACTTTGCAACAGAACAATTGAAAGAGCAAAAAAATAAAATTACTTCAA
TAGAGAAAAAACTATATGAATACAAAGTCTATGAGAAACTTTCCGCAGGTACAGGTTATGGATATTTTGGTGATGGGAAC
TATGATACTGTTTTTTACGACGAAGAATTAGATTACGATTTTGCCTCTTGGGTTTTTGGTGATTCTATGGAACCAACTTA
TCTGAATGGTGAGGTTGTGCTTATAAAACAAACTGGCTTTGATTATGAAGGTGGCATCTATGCCGTAGAGTGGGACGGAC
AAACCTATATTAAGAAAGTTTACAGAGAAAAGGATGGCTTGCGCCTTGTGTCTTTAAATAAAAAATACAATGACAAGTTT
GCTCCTTTTAGTGAAGGCCCTCGTATAATAGGGGAAATTGTCGGTAACTTTATGCCTAAAGAGTACTGA

Domains


Predicted by InterProScan.

(168-254)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  irvR Streptococcus mutans UA159

38.158

100

0.443


Multiple sequence alignment