Detailed information NTG0302960

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: DUN60_RS11380
• Genome accession: NZ_CP031055
• Coordinates: 2599707..2603096 (+)
• Length: 1129 a.a.
• NCBI ID: WP_114633984.1
• Uniprot ID: -
• Organism: Vibrio splendidus strain Vibrio sp
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 2594707..2608096

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DUN60_RS11360	erpA	2594995..2595336 (-)	342	WP_004734539.1	iron-sulfur cluster insertion protein ErpA	-
DUN60_RS11365	hemL	2595633..2596928 (+)	1296	WP_004734538.1	glutamate-1-semialdehyde 2,1-aminomutase	-
DUN60_RS24895	-	2597070..2597195 (-)	126	WP_004734537.1	hypothetical protein	-
DUN60_RS11370	-	2597272..2598357 (+)	1086	WP_004734536.1	AI-2E family transporter	-
DUN60_RS11375	rsmC	2598468..2599490 (+)	1023	WP_054547510.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
DUN60_RS11380	chiS	2599707..2603096 (+)	3390	WP_114633984.1	response regulator	Regulator
DUN60_RS11385	-	2603807..2605489 (+)	1683	WP_004734533.1	ABC transporter substrate-binding protein	-
DUN60_RS11390	-	2605659..2606645 (+)	987	WP_004734532.1	ABC transporter permease	-
DUN60_RS11395	-	2606648..2607673 (+)	1026	WP_004734531.1	ABC transporter permease	-

Sequence

Protein

• Length: 1129 a.a.
• Molecular weight: 127220.84 Da
• Isoelectric Point: 5.4266

>NTDB_id=302960 DUN60_RS11380 WP_114633984.1 2599707..2603096(+) (chiS) [Vibrio splendidus strain Vibrio sp]
MFRFYRKQKFKRLQNTLMLAFLVLSITPVTLIAIFFLQSHSQDLQEQSTSHLVSVRDTKQQQIVDYLQAQESQVMGFVRS
ELANASGGRFYGLINAFQRLGLDIDEARSNAQQRYIQGSGDQIKTSILPESSSFIGSERYRLLHKRYHNSYQELLKRSDF
DDILLVDINGNVAYSIFKRDDYGTNLLTGKYKDSNLGVTFQRLAKDVKDKRKSNEDYTPVIVSDFKDENGKQTAWLGAPI
VQQGYLHSYAMFRLPINGITKLIADLNKSSNIQTLLVGDDHLPRSLAHSQESINLSLDVVDKALAGETAVGTFNNTQDQA
IIAAYTPIELKYATWALVVELPEKEAFARIHQLEKIFVIVMLTAIILVFVASHYLSNFITSPLLKLTWAAEKVSAGDLDE
TMINTERKDEIGRLAVSFERMQRSIREKMQLIKSQNGELEDNLKTIQKQNEELQLANKLKDEFLATTSHELRTPLHGMVG
IAEALISGANGPIPANQKYQLDIIINSGQRLATLVDDLLDYHKMRYGSLDIKKSAVDLSAATSLVLELSHHLLGNKPIRI
INQVPSDLGLVSSDPQRLEQVMYNLVGNAIKYTSEGKIVISASVIDDNIRVQVVDTGQGIPAEYLEHIFEPLIQAGQDSS
NYRQGAGLGLSISRQLIELMGGSLYVSSQPMLGTTFSFTLPLATQDELDSYNESGSYSHFQAPDLIDNTQQENSAISEDP
NGPLLVIADDEPVNLRVLDSFLKLEGYRVRTACDGPETIELIEKEKPELLLLDIMMPGMSGYQVCEALRKQYDHAQLPII
MLTALNQAEDRVRGFEAGANDYLSKPFNKQELAARITAHLSASKAEQRRLENDQLQLELKHRAMVEANLLETQGRLLEQL
ESAPEAIICIREDQRIRFANEAAAKLFRRGQEQLKRSMADEIIAPKYLKVEQAHYCGDIDIYIDDTRQRIPSDILKLPEG
SGLDTMYIFNVGGGVNSNRVNNLETAVEALSSYAFEGDKDKLQQLKELGGEFTRLADKATGEGKNKQELMREVLVDVMTN
AIIYWESVTGETKFAFAEKSGLWRVYLDRSTLQTRTLDKYLRVETLPKTPRWRTVLSSIEFILEHCKEQTPERTHIEMLR
DKLQKLLTS

Nucleotide

• Length: 3390 bp

>NTDB_id=302960 DUN60_RS11380 WP_114633984.1 2599707..2603096(+) (chiS) [Vibrio splendidus strain Vibrio sp]
ATGTTTAGATTCTATCGTAAGCAGAAGTTTAAGCGCCTTCAAAATACCCTAATGCTGGCATTTCTTGTCCTCAGTATTAC
CCCAGTGACACTTATCGCGATATTTTTCCTCCAGTCGCACAGTCAGGATCTTCAGGAACAAAGTACTTCGCACCTTGTTT
CGGTCCGTGATACTAAGCAACAGCAAATTGTCGATTACCTACAAGCTCAAGAGTCCCAAGTCATGGGCTTTGTTCGCTCA
GAACTTGCCAATGCCAGTGGCGGGCGATTCTATGGTTTAATCAATGCATTCCAACGCTTAGGGTTAGATATTGACGAAGC
ACGCAGTAATGCGCAGCAGCGTTACATTCAAGGCTCTGGCGATCAAATCAAGACATCGATTCTTCCAGAATCTAGTAGCT
TTATTGGCAGCGAACGTTATCGACTGCTTCACAAGCGCTACCATAACTCATATCAGGAATTGCTTAAGCGTTCAGACTTT
GATGACATTCTATTAGTCGACATTAACGGTAACGTCGCTTACTCAATCTTTAAGCGTGATGATTACGGCACTAACTTGCT
AACAGGTAAGTACAAAGATTCAAACCTAGGCGTTACCTTTCAACGCTTAGCAAAAGACGTAAAAGACAAACGTAAATCCA
ACGAGGACTATACGCCGGTTATCGTTTCTGACTTTAAAGATGAGAACGGTAAGCAGACGGCTTGGTTAGGTGCACCTATT
GTTCAACAAGGCTACCTGCACAGTTACGCCATGTTTAGGCTGCCAATCAATGGGATTACTAAGCTGATTGCGGATCTCAA
CAAGAGTTCAAATATTCAAACACTGCTTGTGGGTGATGATCACCTGCCACGCAGCCTCGCCCATTCGCAAGAGTCGATTA
ATTTAAGCTTAGACGTTGTCGACAAAGCATTGGCTGGCGAAACAGCCGTTGGTACGTTCAACAACACTCAAGATCAAGCG
ATCATCGCAGCATATACCCCAATTGAGCTGAAATACGCAACATGGGCTCTTGTCGTAGAGCTGCCAGAAAAAGAGGCGTT
TGCCCGTATTCATCAGTTAGAGAAGATCTTCGTGATCGTGATGCTAACGGCGATCATTCTTGTGTTTGTTGCATCGCATT
ATCTGTCCAATTTCATCACTTCCCCTCTCCTCAAGCTCACATGGGCTGCCGAGAAAGTCTCTGCTGGTGATCTTGATGAA
ACCATGATCAATACCGAACGCAAAGATGAGATAGGTCGACTCGCGGTTAGCTTCGAAAGAATGCAGCGATCGATCCGTGA
AAAAATGCAACTCATCAAGAGCCAAAACGGTGAGCTTGAGGACAACCTTAAGACCATTCAAAAGCAAAACGAAGAGTTAC
AACTGGCGAACAAACTTAAAGATGAATTCTTAGCCACCACCTCACATGAATTGAGAACGCCATTGCATGGCATGGTTGGT
ATCGCTGAAGCGCTAATATCTGGTGCTAACGGCCCTATTCCTGCCAACCAGAAGTACCAATTGGATATCATCATCAATAG
TGGTCAGAGGTTGGCTACACTGGTTGATGACCTGCTTGATTATCACAAGATGCGCTATGGCAGCTTGGATATTAAGAAGT
CTGCTGTTGATTTATCTGCTGCCACCAGCTTAGTGCTTGAGTTATCTCATCACCTGTTAGGCAACAAACCGATCCGTATT
ATTAACCAAGTGCCAAGTGACTTAGGTTTAGTCTCATCTGATCCACAACGCCTTGAACAAGTAATGTATAACTTGGTCGG
CAATGCTATCAAGTACACATCCGAAGGTAAGATTGTTATCTCAGCGAGTGTTATCGACGACAATATTCGAGTTCAAGTTG
TCGATACCGGCCAAGGTATCCCAGCAGAGTACCTAGAACACATCTTTGAACCACTGATTCAAGCAGGACAAGACTCAAGT
AACTATCGCCAAGGTGCTGGACTTGGATTGTCCATTAGTCGTCAGCTGATTGAGCTAATGGGTGGCTCACTGTACGTAAG
TAGCCAACCTATGCTTGGCACTACATTCAGCTTTACATTACCTTTAGCTACTCAAGACGAATTGGATAGTTACAATGAAT
CAGGGAGCTACTCACACTTCCAAGCGCCTGATTTGATTGATAACACTCAGCAAGAAAACAGCGCTATCAGTGAAGACCCG
AATGGCCCGTTGTTAGTAATTGCTGATGATGAGCCGGTAAACCTACGCGTGCTAGACAGCTTCTTGAAATTGGAAGGTTA
TCGAGTTCGCACCGCATGTGACGGCCCAGAAACGATTGAACTGATTGAGAAAGAGAAACCAGAATTACTTCTGCTCGACA
TTATGATGCCAGGTATGAGCGGCTATCAGGTTTGTGAAGCACTGCGTAAGCAATACGATCATGCACAATTGCCAATCATC
ATGCTCACAGCTCTTAATCAAGCAGAAGACCGTGTTCGTGGCTTTGAAGCAGGTGCCAACGATTACTTGTCCAAGCCGTT
TAACAAACAGGAACTGGCGGCTCGAATCACAGCGCACTTATCGGCAAGTAAGGCTGAACAAAGACGCCTTGAGAATGACC
AGCTGCAACTGGAGCTCAAACACCGAGCTATGGTTGAAGCGAACTTACTAGAAACTCAAGGACGCTTGCTAGAACAATTA
GAGTCAGCACCAGAAGCCATCATCTGTATTCGAGAAGACCAACGCATTCGCTTTGCCAACGAAGCGGCTGCTAAGCTGTT
TAGACGCGGGCAAGAACAACTCAAGCGCTCAATGGCCGACGAGATCATCGCGCCTAAATACCTGAAGGTGGAACAAGCTC
ACTACTGTGGTGATATTGATATCTATATAGACGACACACGTCAGCGCATTCCAAGTGATATCCTTAAGCTACCTGAAGGC
TCAGGGCTCGACACCATGTATATCTTCAATGTCGGTGGTGGAGTTAACTCAAACCGAGTCAATAACCTTGAAACAGCGGT
TGAGGCACTTTCAAGCTACGCCTTTGAAGGTGACAAAGATAAGCTTCAACAACTGAAGGAGCTTGGCGGTGAATTTACTC
GCCTTGCAGATAAGGCAACCGGTGAAGGTAAAAACAAACAAGAGCTGATGCGTGAAGTACTAGTCGATGTCATGACCAAT
GCCATTATCTACTGGGAGTCTGTTACTGGGGAGACCAAGTTTGCTTTCGCAGAAAAGAGTGGCTTATGGCGAGTCTACTT
AGACCGCAGTACCCTACAAACTAGAACGCTAGACAAATACCTACGAGTAGAAACTCTACCGAAAACACCTCGCTGGCGAA
CGGTACTGAGCTCTATCGAATTCATACTTGAGCACTGTAAAGAACAAACACCAGAAAGAACTCATATCGAGATGCTAAGA
GATAAACTGCAGAAACTACTGACCAGCTAA

Domains

Predicted by InterproScan.

• His Kinase A (phospho-acceptor) domain (HisKA) (460-525)

• HAMP domain (HAMP) (375-427)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (574-683)

• Response regulator receiver domain (Response_reg) (726-836)

• PAS fold (PAS) (877-922)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	76.174	100	0.762