Detailed information    

insolico Bioinformatically predicted

Overview

Name   recO   Type   Machinery gene
Locus tag   ETT50_RS00260 Genome accession   NZ_CP035449
Coordinates   33568..34323 (+) Length   251 a.a.
NCBI ID   WP_002986719.1    Uniprot ID   A2RBY9
Organism   Streptococcus pyogenes strain emm56     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 28568..39323
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT50_RS09710 (ETT50_00245) - 29941..30222 (-) 282 WP_111692952.1 transposase -
  ETT50_RS00250 (ETT50_00250) pcsB 30971..32167 (+) 1197 WP_032464754.1 peptidoglycan hydrolase PcsB -
  ETT50_RS00255 (ETT50_00255) - 32420..33382 (+) 963 WP_032464755.1 ribose-phosphate diphosphokinase -
  ETT50_RS00260 (ETT50_00260) recO 33568..34323 (+) 756 WP_002986719.1 DNA repair protein RecO Machinery gene
  ETT50_RS00265 (ETT50_00265) plsX 34426..35433 (+) 1008 WP_014407186.1 phosphate acyltransferase PlsX -
  ETT50_RS00270 (ETT50_00270) - 35426..35668 (+) 243 WP_032464756.1 phosphopantetheine-binding protein -
  ETT50_RS00275 (ETT50_00275) purC 35819..36523 (+) 705 WP_017649245.1 phosphoribosylaminoimidazolesuccinocarboxamide synthase -

Sequence

Protein


Download         Length: 251 a.a.        Molecular weight: 29516.97 Da        Isoelectric Point: 6.9077

>NTDB_id=302934 ETT50_RS00260 WP_002986719.1 33568..34323(+) (recO) [Streptococcus pyogenes strain emm56]
MQLTESLGIVLFNRNYREDDKLVKIFTEVAGKQMFFVKHISRSKMSSIIQPLTIADFIFKLNDTGLSYVVDYSNVNTYRY
INNDIFRLAYASYVLALADAAIADNESDSHLFTFLKKTLDLMEEGLDYEILTNIFEIQILDRFGISLNFHECAICHRTDL
PLDFSHRFSAVLCSEHYYKDNRRNHLDPNVIYLLSRFQKITFDDLRTISLNKDIKKKLRQFIDELYHDYVGIKLKSKTFI
DNLVKWGDIMK

Nucleotide


Download         Length: 756 bp        

>NTDB_id=302934 ETT50_RS00260 WP_002986719.1 33568..34323(+) (recO) [Streptococcus pyogenes strain emm56]
ATGCAACTAACAGAATCACTAGGCATTGTTCTTTTTAATAGGAATTATCGAGAAGATGATAAATTAGTCAAAATATTTAC
TGAAGTAGCAGGTAAGCAGATGTTTTTCGTGAAACATATTAGTCGTTCCAAAATGTCCTCAATCATTCAACCACTAACGA
TTGCTGATTTTATTTTCAAGTTAAATGATACAGGCTTGTCTTATGTTGTTGACTATAGTAACGTTAACACTTATCGGTAT
ATTAATAATGATATTTTTCGATTAGCCTATGCTAGTTATGTCTTAGCATTAGCTGATGCTGCGATTGCAGATAATGAATC
AGATTCGCATTTGTTTACGTTTTTGAAAAAAACACTTGATTTGATGGAAGAGGGCCTAGATTATGAAATTTTGACAAATA
TTTTTGAAATTCAGATATTAGATCGTTTTGGTATTAGTCTAAACTTTCATGAGTGTGCCATTTGTCATCGCACTGATTTA
CCGCTTGATTTTTCCCATCGTTTTTCAGCTGTACTTTGTTCTGAACATTATTACAAAGACAACCGACGTAATCATTTAGA
TCCAAATGTTATCTACTTGTTGAGTCGATTTCAAAAAATCACATTTGATGATTTGAGAACTATTTCATTGAATAAAGACA
TCAAAAAGAAGCTTCGTCAGTTCATTGATGAGTTGTATCACGACTATGTAGGAATCAAATTAAAAAGTAAAACATTCATT
GATAATTTAGTTAAGTGGGGAGATATTATGAAATGA

Domains

Predicted by InterProScan.

Recombination protein O C terminal (RecO_C)

(83-237)

Recombination protein O N terminal (RecO_N)

(1-73)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A2RBY9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recO Streptococcus pneumoniae R6

60.159

100

0.602