Detailed information    

insolico Bioinformatically predicted

Overview

Name   xerS   Type   Machinery gene
Locus tag   ETT51_RS05330 Genome accession   NZ_CP035448
Coordinates   1011863..1012933 (-) Length   356 a.a.
NCBI ID   WP_038432344.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emm70     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1006863..1017933
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT51_RS05310 (ETT51_05365) citX 1007443..1008021 (+) 579 WP_010922331.1 citrate lyase holo-[acyl-carrier protein] synthase -
  ETT51_RS05315 (ETT51_05370) - 1008036..1009430 (+) 1395 WP_063632501.1 oxaloacetate decarboxylase subunit alpha -
  ETT51_RS05320 (ETT51_05375) citC 1009541..1010593 (-) 1053 WP_063632502.1 [citrate (pro-3S)-lyase] ligase -
  ETT51_RS05325 (ETT51_05380) - 1010682..1011164 (-) 483 WP_002984600.1 PASTA domain-containing protein -
  ETT51_RS05330 (ETT51_05385) xerS 1011863..1012933 (-) 1071 WP_038432344.1 tyrosine recombinase XerS Machinery gene
  ETT51_RS05335 (ETT51_05390) - 1013404..1014102 (+) 699 WP_038432346.1 XRE family transcriptional regulator -
  ETT51_RS05340 (ETT51_05395) ffh 1014237..1015799 (-) 1563 WP_023610007.1 signal recognition particle protein -
  ETT51_RS05345 (ETT51_05400) - 1015814..1016146 (-) 333 WP_002989745.1 putative DNA-binding protein -
  ETT51_RS05350 (ETT51_05405) - 1016244..1016942 (-) 699 WP_002989743.1 GntR family transcriptional regulator -

Sequence

Protein


Download         Length: 356 a.a.        Molecular weight: 41499.62 Da        Isoelectric Point: 9.5552

>NTDB_id=302886 ETT51_RS05330 WP_038432344.1 1011863..1012933(-) (xerS) [Streptococcus pyogenes strain emm70]
MRRELLLEKIETYKAIMPWYVLDYYQSKLAVPYSFTTLYEYLKEYKRFFDWLMDADLTQVPKIADIDLSTLEHLTKKDLE
AFVLYLRERPSLNTYSTKEGLSQTTINRTLSALSSLYKYLTEEVENDQGEPYFYRNVMKKVSTKKKKETLASRAENIKQK
LFLGDETLAFLDYVDKEYEQKLSNRAKSSFRKNKERDLAIIALLLASGVRLSEAVNLDLKDVNLNMMIIEVIRKGGKRDS
VNVAGFAKGYLESYLAVRQRRYKAEKQDLAFFLTEYRGVPNRMDASSIEKMVGKYSEDFKIRVTPHKLRHTLATRLYDAT
KSQVLVSHQLGHSSTQVTDLYTHIVNDEQKNALDNL

Nucleotide


Download         Length: 1071 bp        

>NTDB_id=302886 ETT51_RS05330 WP_038432344.1 1011863..1012933(-) (xerS) [Streptococcus pyogenes strain emm70]
ATGAGACGCGAATTATTACTAGAAAAAATTGAAACCTATAAGGCCATCATGCCTTGGTATGTTTTAGATTATTACCAATC
CAAGTTAGCTGTTCCATATAGCTTTACCACCTTATATGAGTATTTAAAAGAATACAAACGCTTTTTTGATTGGCTGATGG
ATGCTGATTTAACGCAGGTGCCAAAGATTGCTGATATTGACTTGAGCACGCTTGAGCACCTTACCAAGAAGGATTTAGAG
GCCTTTGTGCTTTATTTGCGGGAACGACCTTCTCTCAACACCTATTCCACCAAAGAGGGGCTTTCTCAAACCACTATTAA
TCGGACCTTGTCTGCCTTATCAAGCCTTTACAAGTACTTGACTGAAGAGGTTGAAAATGACCAAGGGGAGCCTTATTTTT
ATCGGAATGTTATGAAAAAAGTGTCAACAAAAAAGAAAAAAGAAACCCTGGCTTCCAGAGCGGAAAATATTAAGCAGAAA
CTGTTTTTAGGTGATGAAACTCTAGCTTTCTTGGATTATGTGGATAAGGAATATGAGCAAAAATTGTCTAATCGTGCCAA
ATCTTCTTTCCGTAAAAATAAGGAGAGGGATTTGGCTATTATTGCTCTACTACTTGCTTCTGGTGTTCGTTTGTCTGAAG
CAGTGAATCTTGATTTAAAAGATGTCAATCTAAATATGATGATTATCGAAGTTATTCGCAAAGGCGGAAAACGTGATTCA
GTCAATGTAGCAGGTTTTGCGAAAGGTTATTTGGAGTCTTATTTAGCTGTTCGTCAGAGACGTTACAAGGCTGAAAAACA
GGATCTTGCTTTCTTTTTAACAGAATACCGTGGCGTTCCAAATCGAATGGATGCTTCTAGTATAGAAAAGATGGTTGGCA
AGTACTCTGAGGATTTTAAAATTCGTGTGACTCCTCACAAATTGCGTCATACGCTAGCGACAAGACTATATGATGCTACT
AAATCTCAGGTGTTAGTTAGTCATCAATTAGGCCATTCCTCTACTCAAGTCACGGATCTTTATACCCATATTGTCAATGA
TGAGCAAAAAAATGCTTTAGATAACCTTTAA

Domains

Predicted by InterProScan.

Phage integrase family (Phage_integrase)

(177-344)

Phage integrase, N-terminal SAM-like domain (Phage_int_SAM_4)

(33-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  xerS Streptococcus pneumoniae R6

80.337

100

0.803