Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiE   Type   Regulator
Locus tag   ETT52_RS08450 Genome accession   NZ_CP035447
Coordinates   1661701..1662375 (-) Length   224 a.a.
NCBI ID   WP_002982458.1    Uniprot ID   A0ABU0A9I5
Organism   Streptococcus pyogenes strain emm97.1     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 1656701..1667375
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT52_RS08435 (ETT52_08425) - 1658339..1659727 (-) 1389 WP_002991236.1 HAMP domain-containing sensor histidine kinase -
  ETT52_RS08440 (ETT52_08430) - 1659724..1660377 (-) 654 WP_002991237.1 response regulator transcription factor -
  ETT52_RS08445 (ETT52_08435) - 1660471..1661688 (-) 1218 WP_002993552.1 ABC transporter permease -
  ETT52_RS08450 (ETT52_08440) amiE 1661701..1662375 (-) 675 WP_002982458.1 ABC transporter ATP-binding protein Regulator
  ETT52_RS08455 (ETT52_08445) - 1662362..1663630 (-) 1269 WP_011285226.1 efflux RND transporter periplasmic adaptor subunit -
  ETT52_RS08460 (ETT52_08450) - 1664054..1664338 (-) 285 WP_168417160.1 ABC transporter -
  ETT52_RS08465 (ETT52_08455) - 1664485..1664781 (-) 297 WP_002993562.1 DUF4298 domain-containing protein -
  ETT52_RS08470 (ETT52_08460) - 1665025..1665261 (+) 237 WP_093974928.1 hypothetical protein -
  ETT52_RS08475 (ETT52_08465) prsA 1665537..1666466 (-) 930 WP_136104774.1 peptidylprolyl isomerase PrsA -
  ETT52_RS08485 (ETT52_08475) - 1666946..1667251 (-) 306 WP_002993568.1 Spi family protease inhibitor -

Sequence

Protein


Download         Length: 224 a.a.        Molecular weight: 24826.67 Da        Isoelectric Point: 5.7977

>NTDB_id=302824 ETT52_RS08450 WP_002982458.1 1661701..1662375(-) (amiE) [Streptococcus pyogenes strain emm97.1]
MLNLKDIRKSYHLGTEEFAILKGIDLEVNEGDFLAIMGPSGSGKSTLMNIIGCLDKPGSGSYAIEGRDVSSLSDNELADL
RNQKIGFVFQNFNLMPKLTACQNVELPLTYMNVPKKERRKRALEMLKLVGLEERSEFKPMELSGGQKQRVAIARALVTNP
SFILGDEPTGALDTKTSVQIMDLFKQFNDNGKTIIIITHEPEVAALCKKTVILRDGNIEHSDIE

Nucleotide


Download         Length: 675 bp        

>NTDB_id=302824 ETT52_RS08450 WP_002982458.1 1661701..1662375(-) (amiE) [Streptococcus pyogenes strain emm97.1]
TTGTTAAACCTTAAAGATATTCGAAAAAGCTATCATCTTGGAACTGAAGAATTTGCGATTTTAAAAGGAATCGATTTAGA
AGTTAACGAGGGTGACTTTTTAGCCATCATGGGACCATCAGGTTCGGGAAAGTCAACATTGATGAATATCATTGGGTGTT
TAGATAAGCCTGGCTCTGGCTCATATGCCATTGAAGGCAGAGACGTGTCATCCTTATCTGATAATGAACTTGCTGATTTG
CGCAATCAAAAAATCGGCTTTGTTTTTCAAAACTTTAACCTGATGCCCAAGCTAACAGCTTGTCAAAATGTCGAATTGCC
CTTGACTTATATGAATGTTCCTAAAAAAGAGCGTCGCAAACGAGCCCTAGAGATGTTAAAGCTAGTAGGATTAGAAGAAC
GTAGTGAATTTAAACCGATGGAGCTATCTGGTGGGCAAAAACAGCGTGTAGCGATTGCAAGAGCTTTAGTCACTAACCCG
AGTTTTATCCTTGGTGATGAGCCAACAGGTGCACTAGACACAAAAACCAGCGTCCAAATCATGGACCTATTTAAACAATT
CAATGATAACGGCAAAACGATTATTATCATCACACACGAGCCTGAAGTAGCTGCCCTATGCAAAAAGACGGTGATCCTAA
GAGATGGTAATATAGAACATTCCGATATAGAGTAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(21-169)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiE Streptococcus salivarius strain HSISS4

34.454

100

0.366

Multiple sequence alignment