Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | DT351_RS04010 | Genome accession | NZ_CP031003 |
| Coordinates | 754831..755832 (+) | Length | 333 a.a. |
| NCBI ID | WP_076786758.1 | Uniprot ID | - |
| Organism | Latilactobacillus curvatus strain TMW 1.1928 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 749831..760832
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DT351_RS03970 (DT351_03970) | - | 750007..751020 (+) | 1014 | WP_081394496.1 | YeiH family protein | - |
| DT351_RS03975 (DT351_03975) | - | 751111..751350 (-) | 240 | WP_004270892.1 | cytochrome b5 domain-containing protein | - |
| DT351_RS03980 (DT351_03980) | - | 751545..751880 (+) | 336 | WP_076786752.1 | hypothetical protein | - |
| DT351_RS03990 (DT351_03990) | - | 752061..752438 (-) | 378 | WP_039099519.1 | hypothetical protein | - |
| DT351_RS03995 (DT351_03995) | - | 752541..753041 (+) | 501 | WP_004270893.1 | VanZ family protein | - |
| DT351_RS04000 (DT351_04000) | - | 753131..753862 (+) | 732 | WP_004270897.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| DT351_RS04005 (DT351_04005) | comGA | 753966..754841 (+) | 876 | WP_116843546.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| DT351_RS04010 (DT351_04010) | comGB | 754831..755832 (+) | 1002 | WP_076786758.1 | type II secretion system F family protein | Machinery gene |
| DT351_RS04015 (DT351_04015) | comGC | 755829..756137 (+) | 309 | WP_004270901.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | Machinery gene |
| DT351_RS04020 (DT351_04020) | - | 756202..756561 (+) | 360 | WP_158022155.1 | hypothetical protein | - |
| DT351_RS11365 | - | 756626..756853 (+) | 228 | WP_158070299.1 | hypothetical protein | - |
| DT351_RS04025 (DT351_04025) | - | 756906..757304 (+) | 399 | WP_240327155.1 | ComGF family competence protein | - |
| DT351_RS04030 (DT351_04030) | - | 757282..757605 (+) | 324 | WP_039099486.1 | hypothetical protein | - |
| DT351_RS04035 (DT351_04035) | - | 757721..758740 (+) | 1020 | WP_307722871.1 | class I SAM-dependent methyltransferase | - |
| DT351_RS04040 (DT351_04040) | - | 758762..759955 (+) | 1194 | WP_004270911.1 | acetate kinase | - |
| DT351_RS04045 (DT351_04045) | - | 760015..760467 (+) | 453 | WP_056967146.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 333 a.a. Molecular weight: 37893.09 Da Isoelectric Point: 9.6278
>NTDB_id=302769 DT351_RS04010 WP_076786758.1 754831..755832(+) (comGB) [Latilactobacillus curvatus strain TMW 1.1928]
MKTKTTVQFNTEFMLLLGRLLQNGFSLQQALEFMPIVFPTQKQWLHQVQTGLEAGKRLAPSLAAVSFPAHLVAQIELTEL
QGNLGECLLHLGQLQRIQQKRRRELVGVIAYPCFLLLFLGALIGMMQIYLFPEIAQFNPTTSATSPLQLFFRVMGTFVIM
AGALISVYFFRWHRRPLLQRLAAAFRWPFIGKTLQAYYQYCLLFDLATCLNNGLNLAEMHQLTHRLAKTSWLVQLMQQLE
TAVQKGGTLLANLADGVFYPPELQLVLAKGSPLQQMAKEVDLLAVIKYDELQRQLKQKVNWLQPLLFILIGIIIICTYLS
ILLPLYHTMEGIS
MKTKTTVQFNTEFMLLLGRLLQNGFSLQQALEFMPIVFPTQKQWLHQVQTGLEAGKRLAPSLAAVSFPAHLVAQIELTEL
QGNLGECLLHLGQLQRIQQKRRRELVGVIAYPCFLLLFLGALIGMMQIYLFPEIAQFNPTTSATSPLQLFFRVMGTFVIM
AGALISVYFFRWHRRPLLQRLAAAFRWPFIGKTLQAYYQYCLLFDLATCLNNGLNLAEMHQLTHRLAKTSWLVQLMQQLE
TAVQKGGTLLANLADGVFYPPELQLVLAKGSPLQQMAKEVDLLAVIKYDELQRQLKQKVNWLQPLLFILIGIIIICTYLS
ILLPLYHTMEGIS
Nucleotide
Download Length: 1002 bp
>NTDB_id=302769 DT351_RS04010 WP_076786758.1 754831..755832(+) (comGB) [Latilactobacillus curvatus strain TMW 1.1928]
ATGAAGACTAAAACCACTGTTCAATTCAATACTGAATTTATGTTGCTGTTAGGTCGCTTACTGCAAAATGGTTTTTCTTT
ACAACAAGCACTTGAGTTCATGCCGATTGTTTTTCCGACGCAAAAGCAGTGGCTGCATCAGGTGCAAACTGGGTTAGAAG
CAGGAAAACGACTAGCACCAAGCTTAGCGGCGGTTTCGTTTCCAGCACACCTTGTTGCACAGATTGAATTGACTGAGTTG
CAGGGAAACTTAGGCGAGTGTTTGTTACATCTTGGCCAATTACAGCGAATTCAACAGAAACGGCGTAGAGAGTTAGTTGG
CGTAATTGCCTATCCCTGTTTTCTACTCCTTTTTCTCGGGGCGTTGATTGGGATGATGCAGATTTATCTTTTTCCGGAAA
TCGCGCAGTTTAACCCAACAACTTCGGCGACATCACCATTACAACTATTTTTTAGAGTGATGGGGACATTCGTTATTATG
GCTGGTGCTCTGATTAGTGTGTATTTTTTCCGTTGGCATCGGCGACCGCTATTACAACGATTGGCGGCGGCATTTAGATG
GCCGTTCATCGGTAAAACGTTGCAGGCTTACTATCAGTATTGTTTATTATTTGATTTAGCGACTTGCCTGAATAACGGCT
TAAACTTGGCCGAAATGCATCAGCTTACACATCGTTTGGCGAAAACATCGTGGCTTGTACAATTAATGCAACAACTTGAA
ACGGCTGTCCAAAAAGGGGGCACGCTATTGGCGAACTTAGCGGATGGCGTTTTTTATCCACCTGAGCTGCAATTAGTGCT
CGCTAAGGGAAGTCCGTTACAACAGATGGCCAAGGAGGTTGATCTGCTTGCAGTCATTAAATACGATGAACTGCAACGGC
AATTGAAACAGAAGGTGAATTGGCTACAACCGCTCTTGTTTATCCTAATTGGGATCATCATTATTTGTACCTATCTCAGT
ATTTTATTACCGCTATATCATACAATGGAGGGAATTTCATGA
ATGAAGACTAAAACCACTGTTCAATTCAATACTGAATTTATGTTGCTGTTAGGTCGCTTACTGCAAAATGGTTTTTCTTT
ACAACAAGCACTTGAGTTCATGCCGATTGTTTTTCCGACGCAAAAGCAGTGGCTGCATCAGGTGCAAACTGGGTTAGAAG
CAGGAAAACGACTAGCACCAAGCTTAGCGGCGGTTTCGTTTCCAGCACACCTTGTTGCACAGATTGAATTGACTGAGTTG
CAGGGAAACTTAGGCGAGTGTTTGTTACATCTTGGCCAATTACAGCGAATTCAACAGAAACGGCGTAGAGAGTTAGTTGG
CGTAATTGCCTATCCCTGTTTTCTACTCCTTTTTCTCGGGGCGTTGATTGGGATGATGCAGATTTATCTTTTTCCGGAAA
TCGCGCAGTTTAACCCAACAACTTCGGCGACATCACCATTACAACTATTTTTTAGAGTGATGGGGACATTCGTTATTATG
GCTGGTGCTCTGATTAGTGTGTATTTTTTCCGTTGGCATCGGCGACCGCTATTACAACGATTGGCGGCGGCATTTAGATG
GCCGTTCATCGGTAAAACGTTGCAGGCTTACTATCAGTATTGTTTATTATTTGATTTAGCGACTTGCCTGAATAACGGCT
TAAACTTGGCCGAAATGCATCAGCTTACACATCGTTTGGCGAAAACATCGTGGCTTGTACAATTAATGCAACAACTTGAA
ACGGCTGTCCAAAAAGGGGGCACGCTATTGGCGAACTTAGCGGATGGCGTTTTTTATCCACCTGAGCTGCAATTAGTGCT
CGCTAAGGGAAGTCCGTTACAACAGATGGCCAAGGAGGTTGATCTGCTTGCAGTCATTAAATACGATGAACTGCAACGGC
AATTGAAACAGAAGGTGAATTGGCTACAACCGCTCTTGTTTATCCTAATTGGGATCATCATTATTTGTACCTATCTCAGT
ATTTTATTACCGCTATATCATACAATGGAGGGAATTTCATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Latilactobacillus sakei subsp. sakei 23K |
56.677 |
100 |
0.574 |