Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | DT426_RS27900 | Genome accession | NZ_CP030982 |
| Coordinates | 5414643..5414927 (-) | Length | 94 a.a. |
| NCBI ID | WP_000843036.1 | Uniprot ID | A0A9W5VII1 |
| Organism | Bacillus cereus strain ZB201708 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 5409643..5419927
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DT426_RS27865 (DT426_27895) | tmk | 5409835..5410461 (+) | 627 | WP_000677218.1 | dTMP kinase | - |
| DT426_RS27870 (DT426_27900) | holB | 5410497..5411480 (+) | 984 | WP_000978578.1 | DNA polymerase III subunit delta' | - |
| DT426_RS27875 (DT426_27905) | - | 5411486..5412313 (+) | 828 | WP_000272429.1 | stage 0 sporulation family protein | - |
| DT426_RS27880 (DT426_27910) | yabA | 5412328..5412678 (+) | 351 | WP_000412063.1 | DNA replication initiation control protein YabA | - |
| DT426_RS27885 (DT426_27915) | - | 5412761..5413501 (+) | 741 | WP_001055355.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| DT426_RS27890 (DT426_27920) | - | 5413488..5413778 (+) | 291 | WP_000414350.1 | GIY-YIG nuclease family protein | - |
| DT426_RS27895 (DT426_27925) | rsmI | 5413747..5414622 (+) | 876 | WP_000267816.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| DT426_RS27900 (DT426_27930) | abrB | 5414643..5414927 (-) | 285 | WP_000843036.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Regulator |
| DT426_RS27905 (DT426_27935) | metG | 5415414..5417396 (+) | 1983 | WP_000134138.1 | methionine--tRNA ligase | - |
| DT426_RS27910 (DT426_27940) | - | 5417563..5418330 (+) | 768 | WP_000895845.1 | TatD family hydrolase | - |
| DT426_RS27915 (DT426_27945) | rnmV | 5418546..5419103 (+) | 558 | WP_000692842.1 | ribonuclease M5 | - |
Sequence
Protein
Download Length: 94 a.a. Molecular weight: 10490.17 Da Isoelectric Point: 4.7174
>NTDB_id=302758 DT426_RS27900 WP_000843036.1 5414643..5414927(-) (abrB) [Bacillus cereus strain ZB201708]
MKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDGNLSLAEGKIILSKEGAE
QILNELQDYIETAK
MKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDGNLSLAEGKIILSKEGAE
QILNELQDYIETAK
Nucleotide
Download Length: 285 bp
>NTDB_id=302758 DT426_RS27900 WP_000843036.1 5414643..5414927(-) (abrB) [Bacillus cereus strain ZB201708]
ATGAAATCTACTGGTATTGTTCGTAAAGTTGATGAATTAGGTCGTGTAGTAATTCCAATCGAATTACGCCGTACTTTAGG
TATTGCAGAAAAGGATGCTCTTGAAATCTATGTTGATGACGAGAAAATCATCTTAAAAAAATATAAACCAAACATGACTT
GCCAAGTAACTGGTGAAGTATCTGACGGTAACCTTTCTTTAGCTGAAGGTAAAATCATCTTAAGCAAAGAAGGCGCTGAG
CAAATCTTAAACGAACTTCAAGATTATATCGAAACAGCAAAATAA
ATGAAATCTACTGGTATTGTTCGTAAAGTTGATGAATTAGGTCGTGTAGTAATTCCAATCGAATTACGCCGTACTTTAGG
TATTGCAGAAAAGGATGCTCTTGAAATCTATGTTGATGACGAGAAAATCATCTTAAAAAAATATAAACCAAACATGACTT
GCCAAGTAACTGGTGAAGTATCTGACGGTAACCTTTCTTTAGCTGAAGGTAAAATCATCTTAAGCAAAGAAGGCGCTGAG
CAAATCTTAAACGAACTTCAAGATTATATCGAAACAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
85.106 |
100 |
0.851 |