Detailed information NTG0302756

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: DT426_RS27695
• Genome accession: NZ_CP030982
• Coordinates: 5377326..5378453 (+)
• Length: 375 a.a.
• NCBI ID: WP_000470754.1
• Uniprot ID: A0A9W3P6A6
• Organism: Bacillus cereus strain ZB201708
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 5372326..5383453

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DT426_RS27665 (DT426_27695)	spoIIIJ	5372366..5373133 (-)	768	WP_000727741.1	YidC family membrane integrase SpoIIIJ	-
DT426_RS27670 (DT426_27700)	rnpA	5373186..5373533 (-)	348	WP_000726621.1	ribonuclease P protein component	-
DT426_RS27675 (DT426_27705)	rpmH	5373610..5373744 (-)	135	WP_000831901.1	50S ribosomal protein L34	-
DT426_RS27680 (DT426_27710)	dnaA	5374309..5375649 (+)	1341	WP_000428018.1	chromosomal replication initiator protein DnaA	-
DT426_RS27685 (DT426_27715)	dnaN	5375828..5376973 (+)	1146	WP_001212884.1	DNA polymerase III subunit beta	-
DT426_RS27690 (DT426_27720)	yaaA	5377101..5377313 (+)	213	WP_000680510.1	S4 domain-containing protein YaaA	-
DT426_RS27695 (DT426_27725)	recF	5377326..5378453 (+)	1128	WP_000470754.1	DNA replication/repair protein RecF	Machinery gene
DT426_RS27700 (DT426_27730)	gyrB	5378493..5380415 (+)	1923	WP_000435979.1	DNA topoisomerase (ATP-hydrolyzing) subunit B	-
DT426_RS27705 (DT426_27735)	gyrA	5380504..5382975 (+)	2472	WP_001282868.1	DNA gyrase subunit A	-

Sequence

Protein

• Length: 375 a.a.
• Molecular weight: 43318.66 Da
• Isoelectric Point: 6.7809

>NTDB_id=302756 DT426_RS27695 WP_000470754.1 5377326..5378453(+) (recF) [Bacillus cereus strain ZB201708]
MFISEIQLKNYRNYEKLELSFEDKVNVIIGENAQGKTNLMEAIYVLAMAKSHRTSNDRELIRWDEEFGQIKGKLQKRNSS
LSLELNISKKGKKAKLNQLEQQKLSQYIGVMNVVMFAPEDLNLVKGSPQVRRRFLDMELGQIAPIYLYELSQYQKVLTQR
NHLLKKMQGNSKNEETMLDVFTLQLIEHGAKILQKRFEFLHLLQEWAAPIHRGISRGLEELEIVYKPSVDVSESMDLSKI
KEVYYESFQSVKQREIFRGTTLIGPHRDDLQFFVNSKNVQVFGSQGQQRTTALSLKLAEIELIYSEVKEYPILLLDDVLS
ELDDYRQSHLLNTIQGKVQTFVTTTSVDGIEHETLKDAKTIHVTNGTVDCEIDRA

Nucleotide

• Length: 1128 bp

>NTDB_id=302756 DT426_RS27695 WP_000470754.1 5377326..5378453(+) (recF) [Bacillus cereus strain ZB201708]
TTGTTTATTTCAGAAATACAATTAAAAAACTATCGCAATTATGAAAAATTAGAGCTTTCCTTTGAAGATAAGGTAAATGT
AATTATCGGCGAAAATGCACAAGGGAAAACAAACTTGATGGAAGCTATTTATGTTTTAGCGATGGCGAAATCTCATAGAA
CCTCTAATGATCGCGAACTTATCCGCTGGGATGAAGAGTTTGGTCAAATAAAAGGGAAATTACAAAAAAGAAACAGTTCT
TTGTCTTTGGAATTAAATATTTCGAAAAAAGGTAAAAAGGCAAAATTAAATCAACTTGAACAACAAAAGTTAAGTCAATA
TATTGGCGTGATGAACGTTGTCATGTTTGCCCCAGAAGATTTAAATCTTGTAAAAGGAAGCCCTCAAGTAAGAAGACGCT
TTTTAGATATGGAATTAGGACAAATAGCTCCTATATATTTGTATGAATTAAGTCAATATCAAAAGGTGCTCACGCAACGA
AATCACTTGTTGAAAAAAATGCAAGGGAATAGTAAGAATGAGGAAACGATGTTGGATGTATTTACACTTCAACTAATTGA
GCATGGTGCGAAAATACTGCAAAAACGTTTTGAATTTTTGCATTTGCTACAGGAATGGGCAGCTCCAATTCATCGCGGTA
TAAGCCGTGGATTAGAAGAGTTAGAAATTGTCTATAAACCAAGTGTAGATGTATCAGAATCAATGGATTTGTCGAAAATA
AAAGAAGTATACTATGAAAGTTTTCAATCTGTGAAACAACGTGAAATTTTCCGTGGTACGACTTTAATTGGTCCTCATCG
TGATGATTTACAATTCTTCGTTAATAGTAAAAATGTTCAAGTCTTTGGTTCGCAAGGGCAACAACGAACGACCGCACTAT
CCCTAAAATTAGCTGAAATTGAATTAATTTATTCAGAGGTTAAAGAATATCCAATCCTTTTGCTGGATGATGTTTTATCA
GAATTAGACGATTATCGTCAATCACATCTGTTAAATACAATTCAAGGAAAGGTGCAAACATTTGTTACAACGACGAGTGT
CGACGGAATTGAACACGAAACATTAAAAGATGCGAAAACAATTCATGTAACGAACGGCACGGTAGATTGTGAAATAGATA
GGGCATAA

Domains

Predicted by InterproScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (2-348)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Bacillus subtilis subsp. subtilis str. 168	66.033	98.133	0.648