Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   DT426_RS20950 Genome accession   NZ_CP030982
Coordinates   4098292..4099086 (-) Length   264 a.a.
NCBI ID   WP_014894889.1    Uniprot ID   A0A9X0VUZ1
Organism   Bacillus cereus strain ZB201708     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 4093292..4104086
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DT426_RS28810 - 4093331..4093639 (-) 309 WP_240672222.1 hypothetical protein -
  DT426_RS20930 (DT426_20955) - 4093927..4094226 (-) 300 WP_127725953.1 hypothetical protein -
  DT426_RS28455 - 4094456..4094593 (-) 138 WP_164852164.1 hypothetical protein -
  DT426_RS20935 (DT426_20960) - 4094702..4095436 (-) 735 WP_127725954.1 hypothetical protein -
  DT426_RS20940 (DT426_20965) - 4095565..4096386 (-) 822 WP_127725955.1 abortive infection family protein -
  DT426_RS20945 (DT426_20970) - 4097164..4098138 (-) 975 WP_127725956.1 tyrosine-type recombinase/integrase -
  DT426_RS20950 (DT426_20975) spo0A 4098292..4099086 (-) 795 WP_014894889.1 sporulation transcription factor Spo0A Regulator
  DT426_RS20960 (DT426_20985) spoIVB 4099376..4100674 (-) 1299 WP_074789158.1 SpoIVB peptidase -
  DT426_RS20965 (DT426_20990) recN 4100793..4102532 (-) 1740 WP_000947759.1 DNA repair protein RecN Machinery gene
  DT426_RS20970 (DT426_20995) argR 4102797..4103246 (-) 450 WP_001032580.1 arginine repressor ArgR -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29385.15 Da        Isoelectric Point: 7.1175

>NTDB_id=302737 DT426_RS20950 WP_014894889.1 4098292..4099086(-) (spo0A) [Bacillus cereus strain ZB201708]
MEKIKVCLVDDNKELVSMLESYVAAQDDMEVIGTAYNGQECLNLLADKQPDVLVLDIIMPHLDGLAVLEKMRHIERLKQP
SVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLTSHIRQVSGKANAMIKRPLPSFRSATTVDGKPKNLDASITSIIHE
IGVPAHIKGYMYLREAISMVYNDIELLGSITKVLYPDIAKKYNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVSMS
KAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 795 bp        

>NTDB_id=302737 DT426_RS20950 WP_014894889.1 4098292..4099086(-) (spo0A) [Bacillus cereus strain ZB201708]
GTGGAGAAAATTAAAGTATGTCTTGTGGATGATAATAAAGAACTAGTATCAATGTTAGAGAGCTATGTAGCTGCTCAAGA
TGATATGGAAGTAATCGGTACTGCTTATAATGGTCAAGAGTGTTTAAACTTATTAGCAGATAAGCAACCTGATGTACTCG
TTTTAGACATTATTATGCCACACTTAGATGGTTTAGCTGTATTGGAAAAAATGCGACATATTGAAAGGTTAAAACAGCCT
AGCGTAATTATGTTGACAGCATTCGGGCAAGAAGATGTGACGAAAAAAGCAGTTGACTTAGGTGCCTCATATTTCATATT
AAAACCATTTGATATGGAGAATTTAACGAGTCATATTCGTCAAGTGAGTGGTAAAGCAAACGCTATGATTAAACGTCCAC
TACCATCATTCCGATCAGCAACAACAGTAGATGGAAAACCGAAAAACTTAGATGCGAGTATTACGAGTATCATTCATGAA
ATTGGTGTACCCGCTCATATTAAAGGATATATGTATTTACGAGAAGCAATCTCCATGGTATACAACGATATCGAATTATT
AGGATCGATTACGAAAGTATTGTATCCAGATATCGCAAAGAAATATAATACAACAGCAAGCCGTGTGGAGCGCGCAATTC
GTCACGCGATTGAAGTAGCGTGGAGCCGTGGGAATATTGATTCTATTTCGTCCTTATTCGGTTATACAGTATCCATGTCA
AAAGCAAAACCTACGAATTCTGAGTTTATCGCGATGGTTGCGGATAAGCTGAGACTTGAACATAAGGCTTCGTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(6-119)

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(154-257)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

80.899

100

0.818

Multiple sequence alignment