Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | DT426_RS09690 | Genome accession | NZ_CP030982 |
| Coordinates | 1891958..1892245 (+) | Length | 95 a.a. |
| NCBI ID | WP_000648324.1 | Uniprot ID | - |
| Organism | Bacillus cereus strain ZB201708 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1886958..1897245
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DT426_RS09670 (DT426_09680) | - | 1888138..1888335 (+) | 198 | WP_014894789.1 | DUF4083 domain-containing protein | - |
| DT426_RS09675 (DT426_09685) | - | 1888364..1888825 (+) | 462 | WP_000024996.1 | NUDIX hydrolase | - |
| DT426_RS09680 (DT426_09690) | nadE | 1888868..1889686 (-) | 819 | WP_000174897.1 | ammonia-dependent NAD(+) synthetase | - |
| DT426_RS09685 (DT426_09695) | - | 1889962..1891842 (+) | 1881 | WP_127725763.1 | ABC transporter permease | - |
| DT426_RS09690 (DT426_09700) | abrB | 1891958..1892245 (+) | 288 | WP_000648324.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Regulator |
| DT426_RS09695 (DT426_09705) | - | 1892521..1893468 (+) | 948 | WP_000099758.1 | serine protease | - |
| DT426_RS09700 (DT426_09710) | - | 1893508..1893816 (-) | 309 | WP_001259903.1 | helix-turn-helix transcriptional regulator | - |
| DT426_RS09705 (DT426_09715) | - | 1893923..1894858 (+) | 936 | WP_098577923.1 | aldo/keto reductase | - |
| DT426_RS09710 (DT426_09720) | - | 1894883..1895512 (+) | 630 | Protein_1852 | MFS transporter | - |
| DT426_RS09720 (DT426_09730) | - | 1895832..1896056 (-) | 225 | WP_000162602.1 | hypothetical protein | - |
| DT426_RS09725 (DT426_09735) | - | 1896141..1896488 (-) | 348 | WP_000426317.1 | DUF4257 domain-containing protein | - |
| DT426_RS09730 (DT426_09740) | - | 1896685..1897162 (+) | 478 | Protein_1855 | DinB family protein | - |
Sequence
Protein
Download Length: 95 a.a. Molecular weight: 10587.32 Da Isoelectric Point: 4.8408
>NTDB_id=302727 DT426_RS09690 WP_000648324.1 1891958..1892245(+) (abrB) [Bacillus cereus strain ZB201708]
MKATGVIRKVDELGRIVIPKELRDVLGIQIKSPLEIFVEADKIILQKYQPYNACQITGDVSEQNISLANGNITVGIEGAE
YLVKEIEKFLNKSEV
MKATGVIRKVDELGRIVIPKELRDVLGIQIKSPLEIFVEADKIILQKYQPYNACQITGDVSEQNISLANGNITVGIEGAE
YLVKEIEKFLNKSEV
Nucleotide
Download Length: 288 bp
>NTDB_id=302727 DT426_RS09690 WP_000648324.1 1891958..1892245(+) (abrB) [Bacillus cereus strain ZB201708]
ATGAAAGCAACAGGAGTTATTCGAAAAGTAGACGAATTAGGACGAATTGTTATCCCTAAAGAATTACGCGATGTATTGGG
AATACAAATCAAATCACCGCTTGAAATTTTTGTAGAAGCAGATAAAATCATTTTGCAAAAATATCAACCTTACAATGCTT
GCCAAATCACAGGTGATGTTTCAGAACAGAACATATCATTAGCAAATGGAAATATTACTGTTGGGATAGAGGGAGCGGAA
TATTTAGTAAAAGAAATAGAAAAGTTTTTAAACAAGAGTGAGGTTTAG
ATGAAAGCAACAGGAGTTATTCGAAAAGTAGACGAATTAGGACGAATTGTTATCCCTAAAGAATTACGCGATGTATTGGG
AATACAAATCAAATCACCGCTTGAAATTTTTGTAGAAGCAGATAAAATCATTTTGCAAAAATATCAACCTTACAATGCTT
GCCAAATCACAGGTGATGTTTCAGAACAGAACATATCATTAGCAAATGGAAATATTACTGTTGGGATAGAGGGAGCGGAA
TATTTAGTAAAAGAAATAGAAAAGTTTTTAAACAAGAGTGAGGTTTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
55.556 |
94.737 |
0.526 |