Detailed information    

insolico Bioinformatically predicted

Overview

Name   pepF   Type   Regulator
Locus tag   EGCR1_RS02600 Genome accession   NZ_CP030932
Coordinates   548069..549886 (+) Length   605 a.a.
NCBI ID   WP_114524084.1    Uniprot ID   -
Organism   Enterococcus gilvus strain CR1     
Function   degradation of XIP; competence shut-off (predicted from homology)   
Competence regulation

Genomic Context

Location: 543069..554886
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EGCR1_RS02580 (EGCR1_02580) - 544019..544549 (-) 531 WP_240318395.1 HAD family hydrolase -
  EGCR1_RS19525 - 544552..544737 (-) 186 WP_240318396.1 hypothetical protein -
  EGCR1_RS02585 (EGCR1_02585) spxA 545515..545913 (+) 399 WP_010781381.1 transcriptional regulator SpxA -
  EGCR1_RS02590 (EGCR1_02590) - 546115..546759 (+) 645 WP_010781380.1 adaptor protein MecA -
  EGCR1_RS02595 (EGCR1_02595) - 546900..547898 (+) 999 WP_114524083.1 competence protein CoiA -
  EGCR1_RS02600 (EGCR1_02600) pepF 548069..549886 (+) 1818 WP_114524084.1 oligoendopeptidase F Regulator
  EGCR1_RS02605 (EGCR1_02605) - 550181..551359 (+) 1179 WP_114524085.1 class C sortase -
  EGCR1_RS02610 (EGCR1_02610) - 551418..552539 (+) 1122 WP_240318397.1 class C sortase -
  EGCR1_RS02615 (EGCR1_02615) - 552574..553224 (-) 651 WP_010781375.1 DsbA family protein -
  EGCR1_RS02620 (EGCR1_02620) - 553221..553829 (-) 609 WP_114524087.1 CYTH domain-containing protein -
  EGCR1_RS02625 (EGCR1_02625) - 554035..554700 (+) 666 WP_010781373.1 GTP pyrophosphokinase -

Sequence

Protein


Download         Length: 605 a.a.        Molecular weight: 69478.10 Da        Isoelectric Point: 4.6163

>NTDB_id=302509 EGCR1_RS02600 WP_114524084.1 548069..549886(+) (pepF) [Enterococcus gilvus strain CR1]
MSEAKQLPTRQEVPAELTWDLTKIFVDDAAFEKKFQDLANELTEVNKIKGSLNQGATEFLMAIDYILDIYRKAEVIYVYA
HLKNDEDTANTTNQALYARASSLIAQVSEAVSWFEPEMLQLSDQEIWAFFEAEPKLELYRHFVEQIISERAHVLPAEQEA
LLAGASEIFSSSADTFSIMNNADLKFPVVKNEEGENVQLTHGVYGQLLESTDRTVREEAFKALYSVYHQFRNTLATTLST
HVKGHNYKAKVRGYTSARQAALSGNHIPEDVYETLTLVVNQYLPLLHRYVELRKELLGLPELHMYDLYTPLLAEAPMKFT
YEEAQEKALEALKPLGEEYLDVVKKAFAERWIDVVENQGKRSGAYSSGAYDTQPYILLNWHDRLDELYTLVHEMGHSAHS
YFTRHTQPYVYGDYSIFLAEIASTTNENLLTSYLLETEKDPKIRAYIINHYLDGFKGTIFRQTQFAEFEHFIHTEDAAGT
PLTSEHLSKFYGELNAKYYGPIVINDEEIKDEWARIPHFYYNYYVYQYATGFSAASALAKRIVEGEPDALDKYLTYLKSG
SSDYPIEVMKKAGVDMTQPTYIEDAMEIFARRLDELEELVAELKE

Nucleotide


Download         Length: 1818 bp        

>NTDB_id=302509 EGCR1_RS02600 WP_114524084.1 548069..549886(+) (pepF) [Enterococcus gilvus strain CR1]
ATGAGTGAGGCAAAGCAATTACCAACGCGTCAAGAAGTACCAGCGGAGTTGACTTGGGATTTAACCAAAATCTTTGTTGA
TGATGCTGCTTTTGAGAAAAAATTTCAAGATTTAGCGAATGAATTGACCGAAGTAAACAAGATCAAGGGAAGTCTAAATC
AAGGAGCAACAGAATTTTTAATGGCGATTGACTATATTTTGGATATTTATCGCAAAGCGGAGGTCATTTATGTCTATGCT
CATTTGAAAAACGATGAAGACACGGCTAATACGACCAACCAAGCACTTTACGCCAGAGCATCTAGTCTGATCGCGCAGGT
CAGTGAAGCGGTTAGCTGGTTTGAACCGGAAATGTTGCAGCTTTCGGATCAAGAAATTTGGGCTTTCTTTGAGGCTGAAC
CAAAACTTGAGTTGTACCGTCACTTTGTTGAACAAATCATTTCAGAAAGAGCCCACGTTTTACCTGCTGAGCAAGAAGCC
TTGTTAGCTGGAGCCAGTGAGATTTTTAGCAGTTCAGCGGATACTTTTTCAATTATGAACAACGCGGATTTGAAATTTCC
AGTTGTAAAAAATGAAGAAGGGGAAAATGTTCAATTGACTCATGGGGTCTATGGACAGTTACTCGAAAGTACGGATCGCA
CAGTTCGCGAGGAGGCATTCAAGGCCTTATATTCCGTTTATCATCAATTTCGAAATACGCTGGCAACAACACTAAGCACA
CATGTAAAAGGGCATAATTATAAAGCAAAAGTACGCGGTTATACGTCTGCCCGCCAAGCCGCATTGAGTGGGAATCATAT
TCCAGAGGATGTTTATGAAACATTGACGCTCGTGGTCAACCAATATTTACCACTGCTGCATCGGTATGTGGAATTGCGTA
AAGAATTGTTGGGCCTGCCAGAGTTGCATATGTATGACCTGTACACACCGCTATTAGCAGAAGCGCCAATGAAGTTTACT
TATGAAGAAGCGCAAGAAAAAGCGCTTGAAGCGTTAAAACCTTTAGGGGAAGAATACTTAGATGTCGTCAAAAAAGCATT
TGCAGAGCGCTGGATCGACGTTGTAGAAAACCAAGGCAAACGCAGCGGTGCCTATTCTTCTGGGGCCTATGATACACAAC
CGTACATTCTTTTAAACTGGCACGACCGATTAGATGAGCTTTACACACTCGTCCATGAAATGGGCCACAGTGCCCATAGC
TATTTTACCCGTCACACACAGCCTTATGTCTATGGAGATTATTCAATCTTTTTAGCAGAAATCGCGTCTACGACGAATGA
AAATCTGCTGACGAGCTACTTATTAGAGACGGAGAAAGATCCGAAAATTCGTGCCTATATTATCAATCATTACTTAGATG
GATTTAAAGGAACCATTTTCCGTCAAACCCAGTTTGCTGAATTCGAGCACTTTATTCATACGGAAGATGCGGCTGGCACA
CCACTGACTAGCGAACACCTTAGCAAGTTTTATGGTGAACTGAATGCGAAATACTATGGGCCGATCGTCATTAACGACGA
GGAAATAAAAGACGAATGGGCAAGAATTCCGCATTTCTACTATAATTATTATGTTTATCAGTATGCGACAGGTTTTTCAG
CGGCAAGCGCATTAGCGAAACGGATCGTTGAAGGGGAGCCAGATGCTTTAGACAAGTACTTAACGTATTTAAAATCCGGC
AGCAGTGATTATCCGATCGAAGTAATGAAAAAAGCGGGCGTGGATATGACACAACCGACATATATCGAAGATGCTATGGA
AATTTTCGCTCGCCGGTTGGATGAGTTAGAAGAATTGGTAGCAGAATTAAAAGAATAA

Domains

Predicted by InterproScan.

Peptidase family M3 (Peptidase_M3)

(207-587)

Oligopeptidase F (Peptidase_M3_N)

(117-186)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pepF Streptococcus salivarius strain HSISS4

55.068

97.851

0.539

Multiple sequence alignment