Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   EGCR1_RS01795 Genome accession   NZ_CP030932
Coordinates   379203..379925 (-) Length   240 a.a.
NCBI ID   WP_010781537.1    Uniprot ID   -
Organism   Enterococcus gilvus strain CR1     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 374203..384925
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EGCR1_RS01770 (EGCR1_01770) - 375063..375623 (+) 561 WP_114523994.1 TetR/AcrR family transcriptional regulator -
  EGCR1_RS01775 (EGCR1_01775) - 375743..376180 (+) 438 WP_010781541.1 DUF948 domain-containing protein -
  EGCR1_RS01780 (EGCR1_01780) - 376183..376749 (+) 567 WP_086305523.1 YtxH domain-containing protein -
  EGCR1_RS01785 (EGCR1_01785) - 376833..377933 (-) 1101 WP_114523995.1 M24 family metallopeptidase -
  EGCR1_RS01790 (EGCR1_01790) ccpA 378129..379133 (+) 1005 WP_010781538.1 catabolite control protein A -
  EGCR1_RS01795 (EGCR1_01795) treR 379203..379925 (-) 723 WP_010781537.1 trehalose operon repressor Regulator
  EGCR1_RS01800 (EGCR1_01800) treP 380320..382266 (+) 1947 WP_114523996.1 PTS system trehalose-specific EIIBC component -
  EGCR1_RS01805 (EGCR1_01805) treC 382282..383904 (+) 1623 WP_114523997.1 alpha,alpha-phosphotrehalase -
  EGCR1_RS01810 (EGCR1_01810) - 383935..384441 (-) 507 WP_114523998.1 QueT transporter family protein -

Sequence

Protein


Download         Length: 240 a.a.        Molecular weight: 27901.86 Da        Isoelectric Point: 8.0019

>NTDB_id=302505 EGCR1_RS01795 WP_010781537.1 379203..379925(-) (treR) [Enterococcus gilvus strain CR1]
MKNYEVIYQAIERGILKEVYEAGSYLPSENKLRQTYHVSRDTIRKALSLLMANGYIQKIQGKGSLVLKREQLRFPVSGLT
SYKELQNSYGYESNTEVVSLKKIEIDQKIARITGFEVGSICWELIRTRAIDQKKVILDKDILLTTIVPELDTEIAKDSIY
RYFENQLGLNISFAEKEITIDALTGEDRELLDLNQHDINIVSVKSRVFTSDARQFQYTESRHQVDKFRFFDFARRHPSTM

Nucleotide


Download         Length: 723 bp        

>NTDB_id=302505 EGCR1_RS01795 WP_010781537.1 379203..379925(-) (treR) [Enterococcus gilvus strain CR1]
ATGAAAAATTATGAAGTGATCTATCAAGCGATTGAACGGGGAATTTTAAAGGAAGTATATGAAGCGGGTTCTTACTTACC
CAGTGAAAACAAACTACGTCAGACCTACCATGTTTCTCGGGATACGATTCGCAAAGCGTTGTCGCTTTTAATGGCGAATG
GCTACATTCAAAAAATTCAAGGCAAGGGCTCCCTCGTCTTAAAGCGAGAGCAATTACGTTTCCCTGTATCCGGTCTGACT
AGCTACAAAGAATTACAAAATTCTTACGGCTATGAAAGCAACACTGAGGTTGTCAGCCTAAAAAAAATTGAGATCGACCA
AAAAATTGCTCGCATAACCGGGTTTGAAGTAGGATCTATCTGCTGGGAGCTGATCCGCACTCGAGCCATTGATCAAAAAA
AAGTGATCCTCGATAAGGATATTCTGCTGACAACGATCGTTCCTGAACTGGATACTGAAATCGCGAAGGATTCGATCTAT
CGTTATTTCGAGAATCAATTAGGTCTCAATATCTCCTTTGCAGAAAAAGAAATCACGATTGATGCTTTGACTGGAGAGGA
CCGCGAGCTGCTTGATTTGAATCAGCATGACATCAATATCGTTTCCGTAAAAAGTCGGGTCTTCACTAGTGACGCTCGTC
AATTTCAATATACCGAGAGTCGCCATCAAGTCGACAAATTTCGCTTTTTTGATTTTGCACGCCGACACCCATCGACCATG
TAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, gntR family (GntR)

(4-66)

UTRA domain (UTRA)

(89-228)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

49.576

98.333

0.487

Multiple sequence alignment