Detailed information NTG0302345

Bioinformatically predicted

Overview

• Name: endA
• Type: Machinery gene
• Locus tag: DR994_RS02150
• Genome accession: NZ_CP030927
• Coordinates: 398715..399596 (-)
• Length: 293 a.a.
• NCBI ID: WP_022096754.1
• Uniprot ID: -
• Organism: Streptococcus thermophilus strain CS9
• Function: cleavage of dsDNA into ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 393715..404596

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DR994_RS02125 (DR994_02180)	vicR	394419..395126 (-)	708	WP_173940375.1	response regulator YycF	Regulator
DR994_RS02130 (DR994_02185)	-	395653..396420 (+)	768	WP_173940376.1	amino acid ABC transporter ATP-binding protein	-
DR994_RS02135 (DR994_02190)	-	396432..397265 (+)	834	WP_022096756.1	transporter substrate-binding domain-containing protein	-
DR994_RS02140 (DR994_02195)	-	397283..397981 (+)	699	WP_022096755.1	amino acid ABC transporter permease	-
DR994_RS02145 (DR994_02200)	-	397993..398643 (+)	651	WP_011226088.1	amino acid ABC transporter permease	-
DR994_RS02150 (DR994_02205)	endA	398715..399596 (-)	882	WP_022096754.1	DNA/RNA non-specific endonuclease	Machinery gene
DR994_RS02155 (DR994_02210)	-	399658..399846 (-)	189	WP_011226090.1	DNA-directed RNA polymerase subunit beta	-
DR994_RS02160 (DR994_02215)	murA	399848..401119 (-)	1272	WP_096811493.1	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	-
DR994_RS02165 (DR994_02220)	-	401189..401425 (-)	237	WP_002946959.1	DUF1146 family protein	-
DR994_RS02170 (DR994_02225)	galE	401613..402626 (-)	1014	WP_002946961.1	UDP-glucose 4-epimerase GalE	-
DR994_RS02175 (DR994_02230)	-	402586..403257 (-)	672	WP_338121103.1	DUF4832 domain-containing protein	-

Sequence

Protein

• Length: 293 a.a.
• Molecular weight: 31813.61 Da
• Isoelectric Point: 10.1789

>NTDB_id=302345 DR994_RS02150 WP_022096754.1 398715..399596(-) (endA) [Streptococcus thermophilus strain CS9]
MAKRKTSLTNKQKRQLVTLIIAVLIAVLGYLGTSNKLSPDNPIRQVASLVSGKSNKSIKSNGSINSQSTPQEQLAETVMT
SSVKSQLGNSLEWNGAGAYIINRNKTNLNAKVSSQPYANNQVKTVQGQTVPTVANALLSKATRQYKNRQETGNGSTSWTP
AGWHQVQNLSGEYSHAVDRGHLLGYALIGGLKGFDASTSNPENIAVQTAWANQAYSDSSTGQNYYESLVRKALDKNKRVR
YRVTLIYEGENLIPSGTHLEAKSADGSLEFNVFVPNVQEGITLDYYSGKVTVN

Nucleotide

• Length: 882 bp

>NTDB_id=302345 DR994_RS02150 WP_022096754.1 398715..399596(-) (endA) [Streptococcus thermophilus strain CS9]
ATGGCAAAAAGAAAGACATCTTTGACAAATAAACAGAAACGTCAGTTAGTCACATTAATAATAGCAGTTTTGATAGCTGT
TTTAGGTTACCTAGGAACCAGTAACAAGCTCTCGCCTGATAATCCTATCAGACAAGTAGCAAGCCTAGTTTCAGGGAAAT
CTAACAAATCCATTAAATCTAATGGTTCAATAAATAGTCAGTCTACACCACAAGAGCAGCTTGCTGAGACAGTAATGACT
AGTTCAGTCAAAAGCCAACTGGGTAATTCCTTGGAATGGAATGGAGCTGGGGCCTACATTATTAATAGAAATAAGACGAA
TCTAAATGCTAAGGTATCAAGCCAACCCTATGCTAATAACCAAGTCAAAACGGTTCAAGGACAAACTGTTCCTACAGTTG
CTAATGCCTTATTAAGTAAAGCAACTAGACAGTACAAAAATCGTCAAGAAACAGGGAATGGTTCAACCTCTTGGACACCA
GCTGGATGGCACCAGGTTCAAAATTTATCAGGAGAGTATAGCCATGCCGTAGATAGAGGCCATTTGCTAGGTTATGCACT
GATAGGTGGTTTGAAAGGATTTGATGCCTCGACTTCAAATCCAGAGAATATTGCTGTTCAAACTGCTTGGGCAAATCAAG
CATATAGCGATAGTTCTACAGGCCAAAACTATTATGAAAGCCTAGTACGAAAAGCTCTGGATAAAAACAAACGTGTTCGT
TATCGTGTGACCCTGATTTATGAAGGAGAGAATCTCATTCCATCAGGAACACATCTTGAAGCTAAGTCAGCAGACGGCTC
ACTTGAGTTTAATGTCTTTGTTCCAAATGTACAAGAGGGAATTACACTAGATTACTATTCAGGAAAAGTAACGGTGAATT
GA

Domains

Predicted by InterproScan.

• DNA/RNA non-specific endonuclease (Endonuclease_NS) (101-266)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
endA	Streptococcus pneumoniae Rx1	70.635	86.007	0.608
endA	Streptococcus pneumoniae D39	70.635	86.007	0.608
endA	Streptococcus pneumoniae R6	70.635	86.007	0.608
endA	Streptococcus pneumoniae TIGR4	70.635	86.007	0.608