Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   DTO10_RS18670 Genome accession   NZ_CP030926
Coordinates   3862619..3862801 (+) Length   60 a.a.
NCBI ID   WP_053344991.1    Uniprot ID   A0AAX0RSP1
Organism   Peribacillus butanolivorans strain PHB-7a     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 3857619..3867801
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DTO10_RS18655 (DTO10_18650) - 3860105..3860296 (-) 192 WP_053344988.1 YjzD family protein -
  DTO10_RS18660 (DTO10_18655) - 3860613..3861341 (+) 729 WP_098174870.1 alpha/beta hydrolase -
  DTO10_RS18665 (DTO10_18660) - 3861444..3862274 (+) 831 WP_116821700.1 NAD(P)-dependent oxidoreductase -
  DTO10_RS18670 (DTO10_18665) comZ 3862619..3862801 (+) 183 WP_053344991.1 ComZ family protein Regulator
  DTO10_RS18675 (DTO10_18670) - 3862849..3863070 (-) 222 WP_053344992.1 hypothetical protein -
  DTO10_RS18680 (DTO10_18675) - 3863267..3864202 (+) 936 WP_098174868.1 beta-ketoacyl-ACP synthase III -
  DTO10_RS18685 (DTO10_18680) fabF 3864257..3865495 (+) 1239 WP_098174867.1 beta-ketoacyl-ACP synthase II -
  DTO10_RS18690 (DTO10_18685) - 3865676..3866446 (+) 771 WP_116821701.1 DUF2268 domain-containing protein -
  DTO10_RS18695 (DTO10_18690) - 3866555..3867310 (+) 756 WP_053344996.1 YjbA family protein -

Sequence

Protein


Download         Length: 60 a.a.        Molecular weight: 6886.03 Da        Isoelectric Point: 4.6509

>NTDB_id=302327 DTO10_RS18670 WP_053344991.1 3862619..3862801(+) (comZ) [Peribacillus butanolivorans strain PHB-7a]
MSSDKTLEFMGIAMKYFPEAKAKLEANGIPFSMDMAEPFMDLFKKVMQEAYELGKQDAQR

Nucleotide


Download         Length: 183 bp        

>NTDB_id=302327 DTO10_RS18670 WP_053344991.1 3862619..3862801(+) (comZ) [Peribacillus butanolivorans strain PHB-7a]
ATGAGTTCAGATAAAACACTTGAATTTATGGGAATCGCTATGAAATACTTCCCAGAGGCTAAAGCAAAGCTGGAAGCAAA
CGGAATTCCTTTTTCAATGGATATGGCAGAGCCGTTCATGGACCTGTTTAAAAAAGTGATGCAAGAAGCATATGAGCTTG
GTAAACAAGATGCTCAGCGTTAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

61.017

98.333

0.6

Multiple sequence alignment