Detailed information    

insolico Bioinformatically predicted

Overview

Name   comA/nlmT   Type   Regulator
Locus tag   ETT59_RS07715 Genome accession   NZ_CP035440
Coordinates   1530848..1531327 (-) Length   159 a.a.
NCBI ID   WP_261752172.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emm124     
Function   transport of ComC (predicted from homology)   
Competence regulation

Genomic Context

Location: 1525848..1536327
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT59_RS07695 (ETT59_07690) - 1526017..1526622 (-) 606 WP_002982799.1 response regulator transcription factor -
  ETT59_RS07700 (ETT59_07695) - 1526603..1528165 (-) 1563 WP_136020803.1 hypothetical protein -
  ETT59_RS07705 (ETT59_07700) - 1528205..1530112 (-) 1908 WP_136305982.1 FtsX-like permease family protein -
  ETT59_RS07710 (ETT59_07705) - 1530114..1530851 (-) 738 WP_136268550.1 ABC transporter ATP-binding protein -
  ETT59_RS07715 (ETT59_07710) comA/nlmT 1530848..1531327 (-) 480 WP_261752172.1 ATP-binding cassette domain-containing protein Regulator
  ETT59_RS07720 (ETT59_07715) - 1531383..1533008 (-) 1626 WP_009880390.1 DUF4135 domain-containing protein -
  ETT59_RS07725 (ETT59_07720) - 1533092..1533247 (-) 156 WP_002982773.1 type A2 lanthipeptide -
  ETT59_RS07730 (ETT59_07725) lacG 1533750..1535156 (-) 1407 WP_136305981.1 6-phospho-beta-galactosidase -

Sequence

Protein


Download         Length: 159 a.a.        Molecular weight: 18400.98 Da        Isoelectric Point: 6.6365

>NTDB_id=302161 ETT59_RS07715 WP_261752172.1 1530848..1531327(-) (comA/nlmT) [Streptococcus pyogenes strain emm124]
MFDGDVMYNISLGRESVSGEQVIETCKRVSIYDDIRSMPMKFHTPLFRDNPSLSGGQKQRISLARELVTTPRILVLDEPT
SALDVKTERIIQKNVEALHCTRVLVTHRLNTVEKADKILIIDNGKIIDYGSHHCLYKNNEYYRDLYDSYMNNYQEEGIK

Nucleotide


Download         Length: 480 bp        

>NTDB_id=302161 ETT59_RS07715 WP_261752172.1 1530848..1531327(-) (comA/nlmT) [Streptococcus pyogenes strain emm124]
ATGTTTGATGGGGATGTGATGTATAACATTTCGCTAGGGAGAGAATCTGTTTCAGGAGAACAGGTTATTGAAACTTGTAA
AAGGGTATCAATATATGATGATATCAGGAGTATGCCAATGAAGTTTCATACCCCACTTTTTCGAGATAATCCATCACTAT
CTGGGGGGCAAAAACAACGAATTTCTTTAGCAAGAGAGTTAGTAACTACCCCTAGAATCTTAGTTCTTGATGAACCTACA
TCAGCTTTAGATGTAAAAACTGAAAGAATAATCCAAAAAAATGTTGAGGCTTTACATTGTACGAGGGTTTTGGTTACCCA
TAGACTTAATACAGTTGAAAAAGCTGATAAGATTTTAATAATAGATAATGGGAAAATTATTGACTATGGTAGTCATCATT
GTTTATATAAAAATAATGAGTACTATCGTGATTTATATGATTCGTACATGAACAACTATCAGGAGGAAGGGATAAAATGA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(28-81)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA/nlmT Streptococcus mutans UA159

39.597

93.711

0.371
  rcrQ Streptococcus mutans UA159

38.667

94.34

0.365

Multiple sequence alignment