Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   ETT60_RS08660 Genome accession   NZ_CP035439
Coordinates   1713583..1714296 (+) Length   237 a.a.
NCBI ID   WP_129284221.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emm77     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1708583..1719296
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT60_RS08650 (ETT60_08640) treC 1709653..1711281 (-) 1629 WP_136114722.1 alpha,alpha-phosphotrehalase -
  ETT60_RS08655 (ETT60_08645) treP 1711348..1713372 (-) 2025 WP_136040338.1 PTS system trehalose-specific EIIBC component -
  ETT60_RS08660 (ETT60_08650) treR 1713583..1714296 (+) 714 WP_129284221.1 trehalose operon repressor Regulator
  ETT60_RS08670 (ETT60_08660) - 1714575..1714814 (-) 240 WP_229293985.1 helix-turn-helix domain-containing protein -
  ETT60_RS08675 (ETT60_08665) - 1715092..1715949 (+) 858 WP_129284222.1 VOC family protein -
  ETT60_RS08680 (ETT60_08670) yaaA 1715991..1716722 (+) 732 WP_012561068.1 peroxide stress protein YaaA -
  ETT60_RS08685 (ETT60_08675) nrdG 1716896..1717510 (-) 615 WP_002982219.1 anaerobic ribonucleoside-triphosphate reductase activating protein -
  ETT60_RS08690 (ETT60_08680) - 1717510..1718019 (-) 510 WP_129284223.1 GNAT family N-acetyltransferase -
  ETT60_RS08695 (ETT60_08685) - 1718028..1718963 (-) 936 WP_129284224.1 Gfo/Idh/MocA family protein -
  ETT60_RS09220 - 1718992..1719138 (-) 147 WP_023610752.1 hypothetical protein -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27574.75 Da        Isoelectric Point: 9.6226

>NTDB_id=302071 ETT60_RS08660 WP_129284221.1 1713583..1714296(+) (treR) [Streptococcus pyogenes strain emm77]
MTKYERIYKDLETKINKDFYKEGDFLPTEIELSQQYQASRDTVRKALSLLTKAGLILKKQGRGTQVIKHHQIMFPISELT
SYQELVSYSNLDSKTNVIAIDKLIVDETLSKLTGFSKNSLVWRVTRQRVVEGVASVLDIDYLSKTLVPIITREIAEHSIY
QYLEKELHLAIDFALKEVTIDQITDRDKILLDLGSDQHVVSVKSKVYLSNNNQFQFTESRHKLEKFKFLDFARRRPK

Nucleotide


Download         Length: 714 bp        

>NTDB_id=302071 ETT60_RS08660 WP_129284221.1 1713583..1714296(+) (treR) [Streptococcus pyogenes strain emm77]
ATGACAAAGTATGAACGTATTTATAAAGACCTCGAAACAAAAATAAACAAAGACTTTTACAAAGAAGGGGATTTTTTACC
TACTGAAATAGAATTGAGTCAACAATACCAAGCTAGCCGAGATACCGTCCGCAAGGCTCTCTCACTTCTCACAAAGGCAG
GTCTTATCCTCAAAAAACAAGGACGTGGCACCCAAGTGATTAAACATCATCAGATCATGTTCCCTATCTCAGAACTAACT
AGTTATCAGGAACTCGTCTCTTACTCAAATCTAGATTCTAAGACCAACGTCATTGCCATTGATAAACTGATTGTGGATGA
GACACTTTCAAAATTGACCGGTTTTAGCAAAAACAGCTTGGTCTGGCGTGTTACACGCCAACGCGTTGTTGAGGGTGTGG
CTTCCGTCTTAGACATTGATTACCTTAGTAAAACTTTGGTGCCAATAATAACAAGGGAAATCGCAGAGCATTCTATTTAT
CAATATTTGGAAAAGGAACTCCATCTCGCCATTGACTTTGCCCTCAAAGAGGTTACCATTGACCAAATAACCGATCGTGA
TAAAATTTTACTTGACCTTGGATCAGACCAACATGTTGTTTCCGTCAAATCCAAAGTCTACCTTTCCAATAATAACCAAT
TCCAATTCACCGAGAGTCGCCATAAACTGGAAAAATTTAAATTTTTAGATTTTGCTCGGCGCAGACCAAAATAA

Domains

Predicted by InterProScan.

UTRA domain (UTRA)

(91-227)

Bacterial regulatory proteins, gntR family (GntR)

(3-66)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

68.376

98.734

0.675