Detailed information    

insolico Bioinformatically predicted

Overview

Name   recN   Type   Machinery gene
Locus tag   ETT61_RS06830 Genome accession   NZ_CP035438
Coordinates   1293214..1294875 (-) Length   553 a.a.
NCBI ID   WP_136020127.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emm22.8     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1288214..1299875
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT61_RS06805 (ETT61_06795) - 1289254..1289529 (-) 276 WP_002983920.1 HU family DNA-binding protein -
  ETT61_RS06810 (ETT61_06800) - 1289628..1290215 (-) 588 WP_136020126.1 YpmS family protein -
  ETT61_RS06815 (ETT61_06805) - 1290193..1291035 (-) 843 WP_002992620.1 SGNH/GDSL hydrolase family protein -
  ETT61_RS06820 (ETT61_06810) - 1291028..1291867 (-) 840 WP_002989125.1 DegV family protein -
  ETT61_RS06825 (ETT61_06815) - 1292095..1293042 (-) 948 WP_053308492.1 LPXTG cell wall anchor domain-containing protein -
  ETT61_RS06830 (ETT61_06820) recN 1293214..1294875 (-) 1662 WP_136020127.1 DNA repair protein RecN Machinery gene
  ETT61_RS06835 (ETT61_06825) - 1294897..1295367 (-) 471 WP_002983907.1 arginine repressor -
  ETT61_RS06840 (ETT61_06830) - 1295354..1296181 (-) 828 WP_111705686.1 TlyA family RNA methyltransferase -
  ETT61_RS06845 (ETT61_06835) - 1296174..1297046 (-) 873 WP_136020128.1 polyprenyl synthetase family protein -
  ETT61_RS06850 (ETT61_06840) - 1297046..1297261 (-) 216 WP_002983901.1 exodeoxyribonuclease VII small subunit -
  ETT61_RS06855 (ETT61_06845) xseA 1297239..1298579 (-) 1341 WP_136020129.1 exodeoxyribonuclease VII large subunit -
  ETT61_RS06860 (ETT61_06850) - 1298732..1299586 (-) 855 WP_002989114.1 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase -

Sequence

Protein


Download         Length: 553 a.a.        Molecular weight: 62299.47 Da        Isoelectric Point: 4.6141

>NTDB_id=301948 ETT61_RS06830 WP_136020127.1 1293214..1294875(-) (recN) [Streptococcus pyogenes strain emm22.8]
MLLEISIKNFAIIDEISLNFENGMTVLTGETGAGKSIIIDAMNMMLGARASTEVIRRGANKAEIEGFFSVDATPELVACL
ESSGIAMEEELIIRRDIFANGRSVSRINGQMVNLATLKQVGQFLVDIHGQHDQEELMRPQLHQQILDAFGDKAFEQLKEN
YQLIFDRYKSLRRQVIDKQKNEKEHKDRIDMLAFQIAELEAAALSRGEDDRLNQERDRLMNHKQIADTLTNAYVMLDNDD
FSSLSNIRSSMNDLLSIEQFDSEYKGMSTSISEAYYILEEVSKQLSDTIDQLDFDGGRLQEIEFRLDTLNSLTRKYGGNV
NEVLDYYDNIIKEYQLLTGDDLSSGDLEAELKSLEKQLVAAATNLSERRHQLAEQLEAEIKAELKELYMEKADFKVHFTT
SKFNRDGNESLEFYISTNPGEGFKPLVKVASGGELSRLMLAIKAAISRKEDKTSIVFDEVDTGVSGRVAQAIAQKIYKIG
RHGQVLAISHLPQVIAIADYQYFISKESKEESTVSKVRLLTPEERVEEIASMIAGTDMTQAALTQARELLAKH

Nucleotide


Download         Length: 1662 bp        

>NTDB_id=301948 ETT61_RS06830 WP_136020127.1 1293214..1294875(-) (recN) [Streptococcus pyogenes strain emm22.8]
ATGTTATTAGAAATTTCTATTAAAAATTTTGCTATTATTGATGAAATTTCCCTAAATTTTGAAAATGGTATGACGGTTTT
GACGGGTGAAACTGGAGCAGGAAAGTCTATTATCATTGATGCTATGAATATGATGCTTGGTGCGCGTGCTAGTACAGAAG
TGATTCGTCGTGGAGCTAATAAAGCAGAAATTGAGGGGTTCTTTTCGGTAGATGCTACCCCAGAACTGGTTGCGTGTCTA
GAATCATCAGGTATTGCTATGGAAGAAGAACTGATTATTCGCCGAGATATCTTTGCCAATGGCAGAAGCGTGAGCCGCAT
TAATGGTCAGATGGTTAACCTAGCCACCTTAAAACAGGTCGGACAGTTTTTGGTAGATATTCATGGGCAACATGACCAAG
AAGAATTAATGCGACCACAGCTCCACCAGCAAATTTTGGACGCTTTTGGTGATAAGGCTTTTGAGCAATTGAAAGAGAAC
TATCAGCTTATTTTTGATCGTTATAAAAGCTTGCGTCGCCAGGTTATTGACAAACAAAAAAATGAAAAGGAACACAAAGA
TCGTATTGATATGTTGGCCTTTCAGATAGCAGAACTTGAAGCTGCTGCCTTGAGTCGAGGTGAGGACGACCGGTTAAATC
AAGAACGTGATCGCTTAATGAACCACAAACAAATTGCTGATACCCTGACCAATGCCTACGTCATGCTAGATAATGACGAT
TTTTCAAGTCTATCCAATATTCGCTCTAGCATGAATGACTTACTATCAATTGAGCAGTTTGATTCAGAGTACAAAGGGAT
GTCGACTTCGATTTCTGAAGCCTATTATATTCTTGAAGAAGTGAGCAAGCAATTATCAGATACCATTGACCAACTGGATT
TTGATGGTGGGCGATTACAGGAAATTGAATTTCGCTTGGATACACTCAATAGCTTAACCCGTAAATACGGTGGTAATGTG
AATGAAGTGCTTGACTACTACGATAATATTATCAAAGAATACCAGCTATTAACAGGAGATGACTTGTCTTCAGGGGACCT
AGAGGCAGAATTGAAAAGCTTAGAAAAACAATTGGTTGCTGCAGCCACTAACTTGAGTGAACGCCGCCATCAATTGGCGG
AGCAATTAGAAGCTGAGATTAAAGCTGAACTTAAGGAACTTTATATGGAAAAAGCAGATTTCAAAGTTCACTTTACCACA
TCAAAATTTAATCGTGATGGTAATGAAAGCTTGGAATTTTACATCTCTACTAATCCAGGCGAAGGATTCAAGCCCCTTGT
CAAGGTGGCTTCTGGAGGAGAGTTATCACGCCTTATGTTAGCCATCAAGGCTGCTATTTCTAGAAAAGAAGATAAGACGA
GTATTGTTTTTGATGAAGTAGATACAGGTGTTTCTGGTCGCGTTGCGCAAGCCATTGCCCAAAAAATTTATAAAATTGGG
CGACATGGGCAAGTTCTCGCTATTTCACACTTACCTCAAGTTATTGCTATTGCTGATTATCAGTATTTTATTTCTAAAGA
AAGTAAAGAAGAGTCCACCGTTTCTAAGGTAAGGTTATTAACTCCTGAAGAACGTGTGGAAGAAATTGCTAGCATGATTG
CAGGAACAGATATGACACAAGCTGCTCTTACGCAGGCTCGTGAACTACTTGCCAAACATTAA

Domains

Predicted by InterProScan.

RecF/RecN/SMC N terminal domain (SMC_N)

(2-511)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recN Bacillus subtilis subsp. subtilis str. 168

43.838

100

0.45