Detailed information    

insolico Bioinformatically predicted

Overview

Name   comE/blpR   Type   Regulator
Locus tag   ETT63_RS09390 Genome accession   NZ_CP035436
Coordinates   1394601..1394819 (-) Length   72 a.a.
NCBI ID   WP_072135532.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emm89.14     
Function   activate transcription of early competence genes; regulation of comX expression (predicted from homology)   
Competence regulation

Genomic Context

Location: 1389601..1399819
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT63_RS07090 (ETT63_07085) - 1390549..1390950 (-) 402 WP_136114556.1 hypothetical protein -
  ETT63_RS07095 (ETT63_07090) - 1391166..1391411 (-) 246 WP_227876799.1 hypothetical protein -
  ETT63_RS07110 (ETT63_07105) - 1391948..1392148 (-) 201 WP_003060803.1 class IIb bacteriocin, lactobin A/cerein 7B family -
  ETT63_RS07115 (ETT63_07110) - 1392161..1392388 (-) 228 WP_042361549.1 Blp family class II bacteriocin -
  ETT63_RS09385 - 1392675..1394404 (+) 1730 Protein_1317 peptide cleavage/export ABC transporter -
  ETT63_RS09390 comE/blpR 1394601..1394819 (-) 219 WP_072135532.1 LytTR family transcriptional regulator DNA-binding domain-containing protein Regulator
  ETT63_RS09395 (ETT63_07135) - 1395120..1395374 (+) 255 WP_011184258.1 hypothetical protein -
  ETT63_RS07145 (ETT63_07140) - 1395680..1396156 (-) 477 Protein_1320 NUDIX hydrolase -
  ETT63_RS07150 (ETT63_07145) era 1396176..1397072 (-) 897 WP_002985743.1 GTPase Era -
  ETT63_RS07155 (ETT63_07150) - 1397192..1397599 (-) 408 WP_002985746.1 diacylglycerol kinase family protein -
  ETT63_RS07160 (ETT63_07155) ybeY 1397580..1398077 (-) 498 WP_002985748.1 rRNA maturation RNase YbeY -
  ETT63_RS07165 (ETT63_07160) - 1398236..1398811 (-) 576 WP_136267385.1 uracil-DNA glycosylase family protein -

Sequence

Protein


Download         Length: 72 a.a.        Molecular weight: 8666.13 Da        Isoelectric Point: 10.5045

>NTDB_id=301796 ETT63_RS09390 WP_072135532.1 1394601..1394819(-) (comE/blpR) [Streptococcus pyogenes strain emm89.14]
MVLYSTRERIEFYGELSEIVKQEPRLFQCHRSFVVNPYNISSIQRLERKVYLKKRFILSSIKAKSYCSKRSS

Nucleotide


Download         Length: 219 bp        

>NTDB_id=301796 ETT63_RS09390 WP_072135532.1 1394601..1394819(-) (comE/blpR) [Streptococcus pyogenes strain emm89.14]
TTGGTTCTTTATTCTACTAGAGAAAGGATTGAATTTTATGGGGAGTTATCTGAAATCGTTAAGCAAGAACCAAGATTATT
TCAATGCCATCGATCATTTGTTGTTAATCCCTACAATATATCTTCAATACAACGATTAGAACGTAAGGTTTATTTAAAAA
AACGGTTCATCTTGTCTAGTATCAAGGCTAAAAGTTACTGCTCTAAAAGAAGCAGTTGA

Domains

Predicted by InterProScan.

LytTr DNA-binding domain (LytTR)

(3-55)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comE/blpR Streptococcus mutans UA159

56.604

73.611

0.417

Multiple sequence alignment