Detailed information    

insolico Bioinformatically predicted

Overview

Name   recJ   Type   Machinery gene
Locus tag   ETT65_RS05850 Genome accession   NZ_CP035434
Coordinates   1131338..1133548 (-) Length   736 a.a.
NCBI ID   WP_136075726.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emm75.1     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1126338..1138548
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT65_RS05820 (ETT65_05820) - 1126571..1127677 (-) 1107 WP_136097851.1 FAD-binding oxidoreductase -
  ETT65_RS05825 (ETT65_05825) - 1127717..1128505 (-) 789 WP_002984887.1 Nif3-like dinuclear metal center hexameric protein -
  ETT65_RS05830 (ETT65_05830) - 1128495..1129181 (-) 687 WP_002990104.1 tRNA (adenine(22)-N(1))-methyltransferase TrmK -
  ETT65_RS05835 (ETT65_05835) nth 1129253..1129909 (-) 657 WP_136075727.1 endonuclease III -
  ETT65_RS05840 (ETT65_05840) - 1129906..1130589 (-) 684 WP_002984890.1 DnaD domain-containing protein -
  ETT65_RS05845 (ETT65_05845) - 1130670..1131188 (-) 519 WP_002990109.1 adenine phosphoribosyltransferase -
  ETT65_RS05850 (ETT65_05850) recJ 1131338..1133548 (-) 2211 WP_136075726.1 single-stranded-DNA-specific exonuclease RecJ Machinery gene
  ETT65_RS05855 (ETT65_05855) - 1133545..1134309 (-) 765 WP_014407517.1 SDR family oxidoreductase -
  ETT65_RS05860 (ETT65_05860) rnz 1134309..1135238 (-) 930 WP_009881223.1 ribonuclease Z -
  ETT65_RS05865 (ETT65_05865) - 1135253..1135888 (-) 636 WP_136075725.1 cystathionine beta-lyase -
  ETT65_RS05870 (ETT65_05870) hflX 1135881..1137119 (-) 1239 WP_136075724.1 GTPase HflX -
  ETT65_RS05875 (ETT65_05875) miaA 1137192..1138091 (-) 900 WP_002984897.1 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA -
  ETT65_RS05880 (ETT65_05880) - 1138225..1138401 (+) 177 WP_002984898.1 DUF3042 family protein -

Sequence

Protein


Download         Length: 736 a.a.        Molecular weight: 82559.44 Da        Isoelectric Point: 4.7844

>NTDB_id=301577 ETT65_RS05850 WP_136075726.1 1131338..1133548(-) (recJ) [Streptococcus pyogenes strain emm75.1]
MIKSKYSWKIKDKKPDDGFFKLAKTKGLIQTAAQLIYDRGIRTEEALDEFLTADLSQLHDPYLLHDMAKAVPRIRQAIEE
GERILIYGDYDADGMTSASIVKETLDIMGAEPLVYLPNRFTDGYGPNQSVYKYFIEQEAVSLIITVDNGVAGHEAIRYAQ
EQEVDVIVTDHHSLPEELPEAFAIIHPEHPDADYPFKHLAGCGVAFKLATALLESLPTDCLDLVAIGTIADMVSLTGENR
VLVKNGLAMLKHTERVGLQELMSLSPIDLEHFNEDAIGFQIAPQLNALGRLDDPNPAIELLTGFDDQEAQAIALMIKKKN
EERKALVQDIFDQAMAMVDPQKPVQVLAQAGWHPGVLGIVAGRIMETIGQTVVVLTIDNGFAKGSARSLEAINIFEALNG
KRELFTAFGGHAGAAGMTLPVDNLEALSDFLCQFVIERGLDQTAKNTLTIDERLSLDDLSLDILKSLDKLAPYGMDHQKP
VFYVKDIRVSQARTIGQDQSHLKFKVSQGKASFDVLAFGQGSQLQEFRQATGLELAVTLSVNHWNGNTSLQFMLVDARVD
GVQLLDLRTKTAKVPEGIPTIEEDPNARVILINDIPEDFKTWRNQFVHKDFDAIYFKNQMKHPYYLTGFGSREQFAKLYK
TIYQFPEFDLRHKLTELSHYLNIEKLLLIKLIQIFEELSFVTIDDGLMTVNPQAQKREISESHIYQDLKELVKFQEIMAL
ASPKEMYDYLVKSNDQ

Nucleotide


Download         Length: 2211 bp        

>NTDB_id=301577 ETT65_RS05850 WP_136075726.1 1131338..1133548(-) (recJ) [Streptococcus pyogenes strain emm75.1]
ATGATTAAATCCAAATATAGCTGGAAAATAAAAGACAAGAAGCCAGATGATGGCTTCTTTAAGCTAGCAAAGACAAAAGG
TCTAATCCAGACCGCCGCTCAGTTGATTTATGATCGAGGGATAAGGACTGAAGAAGCCTTAGATGAGTTTTTAACAGCGG
ACTTGTCTCAACTGCATGATCCTTACTTGCTACATGACATGGCAAAAGCTGTGCCAAGAATTCGTCAAGCTATTGAAGAG
GGCGAACGAATTCTCATTTACGGCGACTATGATGCTGATGGCATGACGTCGGCTTCTATTGTCAAAGAAACCCTAGACAT
AATGGGAGCAGAGCCTTTGGTTTATCTTCCCAACCGCTTTACAGATGGCTATGGCCCCAACCAGAGCGTCTATAAATATT
TTATTGAGCAGGAAGCTGTGTCCCTAATTATCACGGTTGATAATGGCGTGGCCGGACATGAAGCGATTAGATATGCTCAA
GAACAGGAAGTTGATGTCATTGTAACTGACCATCATAGCCTGCCTGAAGAATTGCCAGAAGCCTTTGCCATCATTCATCC
TGAGCATCCTGATGCTGATTATCCCTTTAAACACTTAGCTGGCTGTGGCGTTGCCTTTAAATTGGCAACAGCTTTGCTAG
AAAGTTTACCAACAGACTGTCTAGACTTGGTAGCTATTGGAACCATTGCCGATATGGTAAGCTTGACAGGTGAAAACCGT
GTTTTAGTCAAAAATGGTCTGGCCATGCTCAAACACACCGAAAGAGTGGGCTTGCAGGAGTTGATGTCCTTGTCTCCTAT
TGATTTGGAACATTTTAATGAAGACGCCATTGGCTTTCAGATTGCTCCGCAATTAAATGCTTTAGGGCGCTTAGATGACC
CTAATCCAGCCATTGAGCTACTGACGGGCTTTGATGACCAAGAAGCTCAAGCGATTGCCTTGATGATTAAGAAAAAAAAT
GAAGAGCGTAAGGCCTTAGTCCAAGACATTTTTGATCAAGCGATGGCTATGGTTGATCCTCAAAAACCTGTTCAAGTCTT
GGCACAAGCTGGCTGGCATCCTGGTGTTCTTGGGATTGTCGCTGGTCGTATCATGGAAACTATTGGACAAACGGTCGTCG
TTTTGACCATTGATAATGGCTTTGCAAAAGGCTCGGCCAGAAGTTTAGAAGCTATTAATATTTTTGAAGCCTTGAATGGC
AAGCGTGAGTTATTTACAGCCTTTGGGGGACATGCTGGTGCAGCAGGAATGACCCTGCCCGTTGACAACTTGGAAGCTCT
TTCAGACTTTCTTTGTCAGTTTGTGATAGAACGTGGCTTAGATCAGACTGCCAAAAATACGTTAACTATTGATGAAAGAC
TGTCTTTGGACGACCTTAGCCTTGATATTTTAAAGAGTTTAGATAAATTAGCCCCTTATGGGATGGATCATCAAAAGCCG
GTCTTTTATGTCAAGGACATAAGGGTTAGTCAAGCGCGTACCATAGGGCAAGACCAGAGCCATCTTAAATTTAAAGTCAG
TCAGGGCAAAGCTTCCTTTGACGTACTGGCTTTTGGTCAAGGAAGTCAACTGCAAGAGTTCCGACAAGCTACTGGTTTAG
AATTAGCAGTTACCTTATCTGTCAACCATTGGAATGGGAACACGAGTCTCCAATTCATGTTAGTAGATGCTCGTGTTGAC
GGAGTGCAACTTCTTGACTTAAGGACAAAAACAGCCAAAGTTCCTGAAGGTATTCCGACTATTGAAGAAGACCCAAATGC
CAGAGTCATTCTGATTAATGACATCCCTGAAGATTTCAAAACCTGGCGCAACCAGTTTGTTCACAAGGATTTTGACGCCA
TCTATTTCAAAAATCAGATGAAACATCCTTATTATTTAACAGGATTTGGCAGCAGAGAGCAGTTTGCCAAGCTCTACAAA
ACCATCTATCAGTTTCCTGAATTTGATTTACGACATAAATTGACAGAGTTGAGTCACTATTTAAACATAGAAAAACTTTT
ACTGATTAAGTTGATTCAAATTTTTGAAGAGTTGTCTTTTGTGACGATTGACGATGGGCTGATGACGGTTAACCCCCAAG
CGCAAAAACGAGAGATTTCAGAGAGCCACATTTACCAAGACTTAAAAGAATTGGTGAAATTTCAAGAAATCATGGCTTTG
GCTAGCCCGAAAGAGATGTATGATTATTTGGTGAAATCAAACGATCAATAA

Domains

Predicted by InterProScan.

Single-strand DNA-specific exonuclease, C terminal domain (ssDNA-exonuc_C)

(588-729)

DHH family (DHH)

(83-228)

DHHA1 domain (DHHA1)

(317-435)

RecJ OB domain (RecJ_OB)

(450-556)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recJ Streptococcus pneumoniae strain D39V

63.008

100

0.632
  recJ Bacillus subtilis subsp. subtilis str. 168

34.738

100

0.37