Detailed information    

insolico Bioinformatically predicted

Overview

Name   xerS   Type   Machinery gene
Locus tag   ETT65_RS04730 Genome accession   NZ_CP035434
Coordinates   908464..909534 (+) Length   356 a.a.
NCBI ID   WP_136075816.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emm75.1     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 903464..914534
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT65_RS04710 (ETT65_04710) - 904457..905155 (+) 699 WP_002989743.1 GntR family transcriptional regulator -
  ETT65_RS04715 (ETT65_04715) - 905253..905585 (+) 333 WP_002989745.1 putative DNA-binding protein -
  ETT65_RS04720 (ETT65_04720) ffh 905600..907162 (+) 1563 WP_002993302.1 signal recognition particle protein -
  ETT65_RS04725 (ETT65_04725) - 907297..907995 (-) 699 WP_002993300.1 S24 family peptidase -
  ETT65_RS04730 (ETT65_04730) xerS 908464..909534 (+) 1071 WP_136075816.1 tyrosine recombinase XerS Machinery gene
  ETT65_RS04735 (ETT65_04735) - 910234..910716 (+) 483 WP_002984600.1 PASTA domain-containing protein -
  ETT65_RS04740 (ETT65_04740) citC 910805..911857 (+) 1053 WP_136097875.1 [citrate (pro-3S)-lyase] ligase -
  ETT65_RS04745 (ETT65_04745) - 911967..913361 (-) 1395 WP_168392852.1 oxaloacetate decarboxylase subunit alpha -
  ETT65_RS04750 (ETT65_04750) citX 913376..913954 (-) 579 WP_002991773.1 citrate lyase holo-[acyl-carrier protein] synthase -

Sequence

Protein


Download         Length: 356 a.a.        Molecular weight: 41531.67 Da        Isoelectric Point: 9.5552

>NTDB_id=301569 ETT65_RS04730 WP_136075816.1 908464..909534(+) (xerS) [Streptococcus pyogenes strain emm75.1]
MRRELLLEKIETYKAIMPWYVLDYYQSKLAVPYSFTTLYEYLKEYKRFFDWLMDADLTQAPKIADIDLSTLEHLTKKDLE
AFVLYLRERPFLNTYSTKEGLSQTTINRTLSALSSLYKYLTEEVENDQGEPYFYRNVMKKVSTKKKKETLASRAENIKQK
LFLGDETLAFLDYVDKEYEQKLSNRAKSSFRKNKERDLAIIALLLASGVRLSEAVNLDLKDVNLNMMIIEVIRKGGKRDS
VNVAGFAKGYLESYLAVRQRRYKAEKQDLAFFLTEYRGVPNRMDASSIEKMVGKYSEDFKIRVTPHKLRHTLATRLYDAT
KSQVLVSHQLGHSSTQVTDLYTHIVNDEQKNALDNL

Nucleotide


Download         Length: 1071 bp        

>NTDB_id=301569 ETT65_RS04730 WP_136075816.1 908464..909534(+) (xerS) [Streptococcus pyogenes strain emm75.1]
ATGAGACGCGAATTATTACTAGAAAAAATTGAAACCTACAAGGCTATCATGCCTTGGTATGTTTTAGATTATTACCAATC
CAAATTAGCTGTTCCATACAGCTTTACCACCTTATATGAGTATTTAAAAGAATACAAACGCTTTTTTGATTGGCTGATGG
ATGCTGATTTAACGCAGGCGCCAAAGATTGCTGATATTGACTTGAGCACGCTTGAGCACCTTACCAAGAAGGATTTAGAG
GCCTTTGTGCTTTATTTGCGGGAACGACCTTTTCTCAACACCTATTCCACCAAAGAGGGGCTTTCTCAAACCACTATTAA
TCGGACCTTGTCTGCCTTATCAAGCCTTTACAAGTACTTGACTGAAGAGGTTGAAAATGACCAAGGGGAGCCTTATTTTT
ATCGGAATGTTATGAAAAAAGTGTCAACAAAAAAGAAAAAAGAAACCCTGGCTTCCAGAGCGGAAAATATTAAGCAGAAA
CTGTTTTTAGGTGATGAAACTCTAGCTTTCTTGGATTATGTGGATAAGGAATATGAGCAAAAATTGTCTAATCGTGCCAA
ATCTTCTTTCCGTAAAAATAAGGAGAGGGATTTGGCTATTATTGCTCTACTACTTGCTTCTGGTGTTCGTTTGTCTGAAG
CAGTGAATCTTGATTTAAAAGATGTCAATCTAAATATGATGATTATCGAAGTTATTCGCAAAGGCGGAAAACGTGATTCA
GTCAATGTAGCAGGTTTTGCGAAAGGTTATTTGGAGTCTTATTTAGCTGTTCGTCAGAGACGTTACAAGGCTGAAAAACA
GGATCTTGCTTTCTTTTTAACAGAATACCGTGGCGTTCCAAATCGAATGGATGCTTCTAGTATAGAAAAGATGGTTGGCA
AGTACTCTGAGGATTTTAAAATTCGTGTGACTCCTCACAAATTGCGTCATACGCTAGCGACAAGACTATATGATGCTACT
AAATCTCAGGTGTTAGTTAGTCATCAATTGGGCCATTCCTCTACTCAAGTCACGGATCTTTATACCCATATTGTCAATGA
TGAGCAAAAAAATGCTTTAGATAACCTTTAA

Domains

Predicted by InterProScan.

Phage integrase family (Phage_integrase)

(177-344)

Phage integrase, N-terminal SAM-like domain (Phage_int_SAM_4)

(33-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  xerS Streptococcus pneumoniae R6

80.618

100

0.806

Multiple sequence alignment