Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | DPR03_RS10600 | Genome accession | NZ_CP030754 |
| Coordinates | 2212345..2213382 (+) | Length | 345 a.a. |
| NCBI ID | WP_004811122.1 | Uniprot ID | A0A1P8PHZ9 |
| Organism | Acinetobacter schindleri strain H3 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2207345..2218382
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DPR03_RS10590 | - | 2210381..2211487 (+) | 1107 | WP_071319901.1 | acyltransferase family protein | - |
| DPR03_RS10595 | - | 2211535..2212221 (-) | 687 | WP_071319900.1 | YggS family pyridoxal phosphate-dependent enzyme | - |
| DPR03_RS10600 | pilT | 2212345..2213382 (+) | 1038 | WP_004811122.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| DPR03_RS10605 | pilU | 2213415..2214536 (+) | 1122 | WP_048881346.1 | PilT/PilU family type 4a pilus ATPase | Machinery gene |
| DPR03_RS10610 | fur | 2214613..2215050 (-) | 438 | WP_004811125.1 | ferric iron uptake transcriptional regulator | - |
| DPR03_RS10615 | - | 2215163..2215561 (+) | 399 | WP_004811126.1 | outer membrane protein assembly factor BamE | - |
| DPR03_RS10620 | - | 2215671..2215997 (-) | 327 | WP_004811128.1 | RnfH family protein | - |
| DPR03_RS10625 | - | 2215997..2217076 (-) | 1080 | WP_071319899.1 | hypothetical protein | - |
| DPR03_RS10630 | - | 2217216..2217671 (-) | 456 | WP_004893331.1 | bacteriohemerythrin | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 38209.77 Da Isoelectric Point: 6.5054
>NTDB_id=301332 DPR03_RS10600 WP_004811122.1 2212345..2213382(+) (pilT) [Acinetobacter schindleri strain H3]
MDITELLAFSAKNGASDLHLSAGMPPLIRVDGEVRRINLPALEHKEVHKLVYDIMNDKQRRDYEENLETDFSFEVPGVAR
FRVNAFNQNRGAGAVFRTIPSKVLTIEDLGMGQIFKDICDYPRGLVLVTGPTGSGKSTTLAAMLDYINDNRYDHILTVED
PIEFVHQSKKCLINQREVHRDTHGFNEALRSALREDPDIILVGEMRDLETIRLALTAAETGHLVFGTLHTTSAAKTIDRV
IDVFPAEEKDMVRAMLSESLQAVVSQTLLKKNGGGRVAAHEIMIGIPAIRNLIRENKVAQMYSAIQTGANYGMTTLDQSL
KTLVSKGVISPQVARTAAKQPESFL
MDITELLAFSAKNGASDLHLSAGMPPLIRVDGEVRRINLPALEHKEVHKLVYDIMNDKQRRDYEENLETDFSFEVPGVAR
FRVNAFNQNRGAGAVFRTIPSKVLTIEDLGMGQIFKDICDYPRGLVLVTGPTGSGKSTTLAAMLDYINDNRYDHILTVED
PIEFVHQSKKCLINQREVHRDTHGFNEALRSALREDPDIILVGEMRDLETIRLALTAAETGHLVFGTLHTTSAAKTIDRV
IDVFPAEEKDMVRAMLSESLQAVVSQTLLKKNGGGRVAAHEIMIGIPAIRNLIRENKVAQMYSAIQTGANYGMTTLDQSL
KTLVSKGVISPQVARTAAKQPESFL
Nucleotide
Download Length: 1038 bp
>NTDB_id=301332 DPR03_RS10600 WP_004811122.1 2212345..2213382(+) (pilT) [Acinetobacter schindleri strain H3]
ATGGACATTACAGAATTATTAGCATTTTCTGCTAAAAATGGCGCGTCAGATTTACACTTATCTGCGGGGATGCCACCACT
GATTCGTGTTGATGGTGAAGTTCGTCGTATTAACCTGCCTGCCCTAGAACATAAAGAAGTGCACAAGCTGGTTTACGATA
TCATGAACGATAAACAGCGCCGTGACTATGAAGAAAATCTAGAAACTGACTTTTCCTTTGAAGTTCCTGGCGTTGCCCGT
TTCCGTGTCAACGCATTTAACCAGAACCGTGGTGCCGGTGCCGTATTCCGTACCATTCCTTCTAAAGTTTTAACCATTGA
AGATCTGGGCATGGGGCAGATTTTTAAAGATATTTGTGACTATCCGCGTGGTCTGGTACTGGTCACTGGTCCAACCGGTT
CAGGTAAATCAACGACACTGGCAGCGATGCTGGACTATATCAATGATAACCGTTATGACCATATTCTGACCGTCGAAGAT
CCAATTGAATTTGTACACCAATCCAAAAAGTGTCTGATCAACCAGCGTGAAGTGCATCGTGACACGCATGGTTTCAATGA
AGCATTACGTTCTGCATTACGTGAAGACCCGGATATTATCCTGGTGGGTGAGATGCGTGACCTTGAAACCATCCGTCTGG
CACTCACTGCTGCTGAAACCGGTCACCTGGTGTTTGGCACCCTGCATACAACTTCCGCTGCTAAAACTATTGACCGTGTA
ATCGACGTATTCCCGGCCGAAGAAAAAGACATGGTTCGTGCCATGCTGTCTGAATCATTACAAGCAGTCGTTTCACAAAC
CCTGCTCAAGAAAAATGGTGGTGGTCGTGTCGCTGCACATGAAATCATGATCGGTATTCCGGCCATCCGTAACCTGATCC
GTGAAAACAAAGTTGCTCAAATGTACTCTGCCATTCAGACCGGTGCCAACTATGGTATGACTACGCTGGATCAGAGCCTG
AAAACACTGGTATCTAAAGGCGTGATCAGCCCACAAGTTGCGCGTACTGCTGCTAAACAGCCTGAATCTTTCCTATAA
ATGGACATTACAGAATTATTAGCATTTTCTGCTAAAAATGGCGCGTCAGATTTACACTTATCTGCGGGGATGCCACCACT
GATTCGTGTTGATGGTGAAGTTCGTCGTATTAACCTGCCTGCCCTAGAACATAAAGAAGTGCACAAGCTGGTTTACGATA
TCATGAACGATAAACAGCGCCGTGACTATGAAGAAAATCTAGAAACTGACTTTTCCTTTGAAGTTCCTGGCGTTGCCCGT
TTCCGTGTCAACGCATTTAACCAGAACCGTGGTGCCGGTGCCGTATTCCGTACCATTCCTTCTAAAGTTTTAACCATTGA
AGATCTGGGCATGGGGCAGATTTTTAAAGATATTTGTGACTATCCGCGTGGTCTGGTACTGGTCACTGGTCCAACCGGTT
CAGGTAAATCAACGACACTGGCAGCGATGCTGGACTATATCAATGATAACCGTTATGACCATATTCTGACCGTCGAAGAT
CCAATTGAATTTGTACACCAATCCAAAAAGTGTCTGATCAACCAGCGTGAAGTGCATCGTGACACGCATGGTTTCAATGA
AGCATTACGTTCTGCATTACGTGAAGACCCGGATATTATCCTGGTGGGTGAGATGCGTGACCTTGAAACCATCCGTCTGG
CACTCACTGCTGCTGAAACCGGTCACCTGGTGTTTGGCACCCTGCATACAACTTCCGCTGCTAAAACTATTGACCGTGTA
ATCGACGTATTCCCGGCCGAAGAAAAAGACATGGTTCGTGCCATGCTGTCTGAATCATTACAAGCAGTCGTTTCACAAAC
CCTGCTCAAGAAAAATGGTGGTGGTCGTGTCGCTGCACATGAAATCATGATCGGTATTCCGGCCATCCGTAACCTGATCC
GTGAAAACAAAGTTGCTCAAATGTACTCTGCCATTCAGACCGGTGCCAACTATGGTATGACTACGCTGGATCAGAGCCTG
AAAACACTGGTATCTAAAGGCGTGATCAGCCCACAAGTTGCGCGTACTGCTGCTAAACAGCCTGAATCTTTCCTATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Acinetobacter nosocomialis M2 |
95.652 |
100 |
0.957 |
| pilT | Acinetobacter baumannii D1279779 |
95.362 |
100 |
0.954 |
| pilT | Acinetobacter baumannii strain A118 |
95.362 |
100 |
0.954 |
| pilT | Acinetobacter baylyi ADP1 |
87.209 |
99.71 |
0.87 |
| pilT | Pseudomonas aeruginosa PAK |
84.302 |
99.71 |
0.841 |
| pilT | Pseudomonas stutzeri DSM 10701 |
84.012 |
99.71 |
0.838 |
| pilT | Legionella pneumophila strain Lp02 |
74.709 |
99.71 |
0.745 |
| pilT | Legionella pneumophila strain ERS1305867 |
74.709 |
99.71 |
0.745 |
| pilT | Neisseria meningitidis 8013 |
68.116 |
100 |
0.681 |
| pilT | Neisseria gonorrhoeae MS11 |
67.536 |
100 |
0.675 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
69.88 |
96.232 |
0.672 |
| pilT | Vibrio cholerae strain A1552 |
69.88 |
96.232 |
0.672 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
51.884 |
100 |
0.519 |
| pilU | Vibrio cholerae strain A1552 |
41.298 |
98.261 |
0.406 |
| pilU | Pseudomonas stutzeri DSM 10701 |
41.692 |
95.942 |
0.4 |
| pilU | Acinetobacter baylyi ADP1 |
38.15 |
100 |
0.383 |