Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | ABAYE_RS10575 | Genome accession | NC_010410 |
| Coordinates | 2127363..2127743 (-) | Length | 126 a.a. |
| NCBI ID | WP_000836914.1 | Uniprot ID | A0A098SJS3 |
| Organism | Acinetobacter baumannii AYE | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2122363..2132743
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABAYE_RS10545 (ABAYE2064) | tadA | 2122482..2122985 (-) | 504 | WP_001997771.1 | tRNA adenosine(34) deaminase TadA | - |
| ABAYE_RS10550 (ABAYE2065) | - | 2122992..2124116 (-) | 1125 | WP_001983908.1 | enoyl-CoA hydratase/isomerase family protein | - |
| ABAYE_RS10555 (ABAYE2066) | ung | 2124113..2124826 (-) | 714 | WP_001177527.1 | uracil-DNA glycosylase | - |
| ABAYE_RS10560 (ABAYE2067) | - | 2124877..2125473 (-) | 597 | WP_000908449.1 | 6-carboxytetrahydropterin synthase | - |
| ABAYE_RS10565 (ABAYE2068) | gspK | 2125703..2126662 (-) | 960 | WP_000301478.1 | type II secretion system minor pseudopilin GspK | - |
| ABAYE_RS10570 (ABAYE2069) | xcpW | 2126662..2127363 (-) | 702 | WP_000594579.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| ABAYE_RS10575 (ABAYE2070) | xcpV | 2127363..2127743 (-) | 381 | WP_000836914.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| ABAYE_RS10580 (ABAYE2071) | - | 2127733..2128287 (-) | 555 | WP_000841373.1 | type II secretion system protein | - |
| ABAYE_RS10585 (ABAYE2072) | - | 2128297..2128905 (-) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| ABAYE_RS10590 (ABAYE2073) | - | 2128943..2129716 (-) | 774 | WP_000497300.1 | TatD family hydrolase | - |
| ABAYE_RS10595 (ABAYE2074) | - | 2129734..2130075 (-) | 342 | WP_001183027.1 | PilZ domain-containing protein | - |
| ABAYE_RS10600 (ABAYE2075) | - | 2130087..2131067 (-) | 981 | WP_001075416.1 | DNA polymerase III subunit delta' | - |
| ABAYE_RS10605 (ABAYE2076) | kdsB | 2131079..2131840 (-) | 762 | WP_000680692.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 14074.34 Da Isoelectric Point: 10.0341
>NTDB_id=30133 ABAYE_RS10575 WP_000836914.1 2127363..2127743(-) (xcpV) [Acinetobacter baumannii AYE]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKRKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKRKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=30133 ABAYE_RS10575 WP_000836914.1 2127363..2127743(-) (xcpV) [Acinetobacter baumannii AYE]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCTGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACTCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAGTTTGTGGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACTCAAAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATC
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGAG
AAAAGTACAAAATGGCATTACACATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCTGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACTCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAGTTTGTGGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACTCAAAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATC
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGAG
AAAAGTACAAAATGGCATTACACATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
99.206 |
100 |
0.992 |