Detailed information    

insolico Bioinformatically predicted

Overview

Name   comX/sigX/comX2/sigX2   Type   Regulator
Locus tag   ETT68_RS01510 Genome accession   NZ_CP035431
Coordinates   276826..277377 (+) Length   183 a.a.
NCBI ID   WP_010921894.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emm105     
Function   activate transcription of late competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 271826..282377
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT68_RS01510 (ETT68_01510) comX/sigX/comX2/sigX2 276826..277377 (+) 552 WP_010921894.1 sigma-70 family RNA polymerase sigma factor Regulator
  ETT68_RS01515 (ETT68_01515) - 277988..279117 (+) 1130 Protein_240 ISAs1-like element IS1548 family transposase -
  ETT68_RS01525 (ETT68_01525) - 279280..279807 (+) 528 WP_002991099.1 YqeG family HAD IIIA-type phosphatase -
  ETT68_RS01530 (ETT68_01530) yqeH 279807..280925 (+) 1119 WP_015016688.1 ribosome biogenesis GTPase YqeH -
  ETT68_RS01535 (ETT68_01535) yhbY 280950..281258 (+) 309 WP_002991094.1 ribosome assembly RNA-binding protein YhbY -
  ETT68_RS01540 (ETT68_01540) - 281327..281959 (+) 633 WP_011184179.1 nicotinate-nucleotide adenylyltransferase -

Sequence

Protein


Download         Length: 183 a.a.        Molecular weight: 22281.08 Da        Isoelectric Point: 10.0375

>NTDB_id=301263 ETT68_RS01510 WP_010921894.1 276826..277377(+) (comX/sigX/comX2/sigX2) [Streptococcus pyogenes strain emm105]
MSCCFFVVLFILGIVKKKRRLKMSIETRAAFEKVKPIILKLKRHYYIQLWDRDDWLQEGHIILLQLLERYPELIEEEERL
YRYFKTKFSSYLKDLLRRQESQKRQFHKLAYEEIGEVAHAIPSRGLWLDDYVAYQEVIASLENQLNSQERMQFQALIRGE
RFKGRRALLRKISPYFKEFAQQL

Nucleotide


Download         Length: 552 bp        

>NTDB_id=301263 ETT68_RS01510 WP_010921894.1 276826..277377(+) (comX/sigX/comX2/sigX2) [Streptococcus pyogenes strain emm105]
GTGTCCTGTTGTTTTTTTGTGGTTCTCTTTATACTAGGGATAGTTAAAAAGAAAAGGAGACTCAAAATGTCGATAGAGAC
AAGAGCAGCGTTTGAAAAAGTTAAGCCCATTATTTTGAAATTAAAGCGACACTATTATATTCAATTGTGGGATAGAGATG
ACTGGTTACAAGAAGGACATATTATCTTATTACAGTTACTAGAAAGGTACCCAGAGTTAATTGAGGAAGAAGAGCGTTTA
TATCGCTATTTTAAAACAAAATTTTCATCTTATTTGAAAGATTTATTACGCCGTCAAGAAAGTCAAAAGCGTCAGTTTCA
TAAGTTAGCATATGAAGAGATAGGGGAGGTTGCACATGCCATTCCATCGAGAGGGTTATGGCTAGACGACTATGTGGCTT
ATCAAGAGGTAATAGCTAGCTTAGAGAACCAATTAAATTCGCAAGAGCGTATGCAGTTTCAAGCACTTATCAGGGGCGAA
CGTTTCAAGGGAAGACGTGCTCTACTTAGGAAGATCAGTCCCTATTTTAAGGAATTTGCACAGCAGTTGTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.