Detailed information    

insolico Bioinformatically predicted

Overview


Name   recJ   Type   Machinery gene
Locus tag   ETT70_RS03830 Genome accession   NZ_CP035429
Coordinates   729791..732001 (+) Length   736 a.a.
NCBI ID   WP_136275812.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emmNA     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 724791..737001
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT70_RS03800 (ETT70_03790) - 724938..725114 (-) 177 WP_002984898.1 DUF3042 family protein -
  ETT70_RS03805 (ETT70_03795) miaA 725248..726147 (+) 900 WP_002990117.1 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA -
  ETT70_RS03810 (ETT70_03800) hflX 726220..727458 (+) 1239 WP_136112340.1 GTPase HflX -
  ETT70_RS03815 (ETT70_03805) - 727451..728086 (+) 636 WP_002990114.1 cystathionine beta-lyase -
  ETT70_RS03820 (ETT70_03810) rnz 728101..729030 (+) 930 WP_009881223.1 ribonuclease Z -
  ETT70_RS03825 (ETT70_03815) - 729030..729794 (+) 765 WP_002984893.1 SDR family oxidoreductase -
  ETT70_RS03830 (ETT70_03820) recJ 729791..732001 (+) 2211 WP_136275812.1 single-stranded-DNA-specific exonuclease RecJ Machinery gene
  ETT70_RS03835 (ETT70_03825) - 732151..732669 (+) 519 WP_002990109.1 adenine phosphoribosyltransferase -
  ETT70_RS03840 (ETT70_03830) - 732750..733433 (+) 684 WP_002984890.1 DnaD domain-containing protein -
  ETT70_RS03845 (ETT70_03835) nth 733430..734086 (+) 657 WP_014407519.1 endonuclease III -
  ETT70_RS03850 (ETT70_03840) - 734158..734844 (+) 687 WP_136112405.1 tRNA (adenine(22)-N(1))-methyltransferase TrmK -
  ETT70_RS03855 (ETT70_03845) - 734834..735622 (+) 789 WP_136112406.1 Nif3-like dinuclear metal center hexameric protein -
  ETT70_RS03860 (ETT70_03850) - 735662..736771 (+) 1110 WP_136112407.1 FAD-binding oxidoreductase -

Sequence


Protein


Download         Length: 736 a.a.        Molecular weight: 82589.49 Da        Isoelectric Point: 4.7868

>NTDB_id=301087 ETT70_RS03830 WP_136275812.1 729791..732001(+) (recJ) [Streptococcus pyogenes strain emmNA]
MIKSKYSWKIKDKKPDDGFFKLAKTKGLTQTAAQLIYDRGIRTEEALDEFLTADLSQLHDPYLLHDMAKAVPRIRQAIEE
GERILIYGDYDADGMTSASIVKETLDMMGAEPLVYLPNRFTDGYGPNQSVYKYFIEQEAVSLIITVDNGVAGHEAIRYAQ
EQEVDVIVTDHHSLPEELPEAFAIIHPEHPDADYPFKHLAGCGVAFKLATALLESLPTDCLDLVAIGTIADMVSLTGENR
VLVKNGLAMLKHTERVGLEELMSLSPIDLEYFNEDAIGFQIAPQLNALGRLDDPNPAIELLTGFDDQEARAIALMIKKKN
EERKALVQDIFDQAMAMVDPQKPVQVLAQAGWHPGVLGIVAGRIMETIGQTVVVLTIDNGFAKGSARSLEAINIFEALNG
KRELFTAFGGHAGAAGMTLPVDNLEALSDFLCQFVIERGLDQTAKNTLTIDERLSLDDLSLDILKSLDKLAPYGMNHQKP
VFYVKDIRVSQARTIGQDQSHLKFKVSQGKASFDVLAFGQGSQLQEFRQATGLELAVTLSVNHWNGNTSLQFMLVDARVD
GVQLLDLRTKTAKVPEGIPTIEEDPNARVILINDIPEDFKAWRNQFVHKDFDAIYFKNQMKHPYYLTGFGSREQFAKLYK
TIYQFPEFDLRHKLTELSHYLNIEKLLLIKLIQIFEELSFVTIDDGLMTVNPQAQKREISESHIYQDLKELVKFQEIMAL
ASPKEMYDYLVKSNDQ

Nucleotide


Download         Length: 2211 bp        

>NTDB_id=301087 ETT70_RS03830 WP_136275812.1 729791..732001(+) (recJ) [Streptococcus pyogenes strain emmNA]
ATGATTAAATCCAAATATAGCTGGAAAATAAAAGACAAGAAGCCAGATGATGGCTTCTTTAAGCTAGCAAAGACAAAAGG
TCTAACCCAGACCGCCGCTCAGTTGATTTATGATCGAGGGATAAGGACTGAAGAAGCCTTAGATGAGTTTTTAACAGCGG
ACTTGTCTCAACTGCATGATCCTTACTTGCTACATGACATGGCAAAAGCTGTGCCAAGAATTCGTCAAGCTATTGAAGAG
GGCGAACGAATTCTCATTTACGGCGACTATGATGCTGATGGCATGACGTCGGCTTCTATTGTCAAAGAAACCCTAGACAT
GATGGGAGCAGAGCCTTTGGTTTATCTTCCCAACCGCTTTACAGATGGCTATGGCCCCAACCAGAGCGTCTATAAATATT
TTATTGAGCAGGAAGCTGTGTCCCTAATTATCACGGTTGATAATGGCGTGGCCGGACATGAAGCGATTAGATATGCTCAA
GAACAGGAAGTTGATGTCATTGTAACTGACCATCATAGCCTGCCTGAAGAATTGCCAGAAGCCTTTGCCATCATTCATCC
TGAGCATCCTGATGCTGATTATCCCTTTAAACACTTAGCTGGCTGTGGCGTTGCCTTTAAATTGGCAACAGCTTTGCTAG
AAAGTTTACCAACAGACTGTCTAGACTTGGTAGCTATTGGAACCATTGCCGATATGGTAAGCTTGACAGGTGAAAACCGT
GTTTTAGTCAAAAATGGTCTGGCCATGCTCAAACACACCGAAAGAGTGGGCTTGGAGGAGTTGATGTCCTTGTCTCCTAT
TGATTTGGAATATTTTAATGAAGACGCCATTGGCTTTCAGATTGCTCCGCAATTAAATGCTTTAGGGCGCTTAGATGACC
CTAATCCAGCCATTGAGCTACTGACGGGCTTTGATGACCAAGAAGCTCGAGCGATTGCCTTGATGATTAAGAAAAAAAAT
GAAGAGCGTAAGGCCTTAGTCCAAGACATTTTTGACCAAGCGATGGCTATGGTTGATCCTCAAAAACCTGTTCAAGTCTT
GGCACAAGCTGGCTGGCATCCTGGTGTTCTTGGGATTGTCGCTGGTCGTATCATGGAAACTATTGGACAAACGGTCGTCG
TTTTGACCATTGATAATGGCTTTGCAAAAGGCTCGGCCAGAAGTTTAGAAGCTATTAATATTTTTGAAGCCTTGAATGGC
AAGCGTGAGTTATTTACAGCCTTTGGGGGACATGCTGGTGCAGCAGGAATGACCCTGCCCGTTGACAACTTGGAAGCTCT
TTCAGACTTTCTTTGTCAGTTTGTGATAGAACGTGGCTTAGATCAGACTGCCAAAAATACGTTAACTATTGATGAAAGAC
TGTCTTTGGACGACCTTAGCCTTGATATTTTAAAGAGTTTAGATAAATTAGCCCCTTATGGGATGAATCATCAAAAGCCG
GTCTTTTATGTCAAGGACATAAGGGTTAGTCAAGCGCGTACCATAGGGCAAGACCAGAGCCATCTTAAATTTAAAGTCAG
TCAGGGCAAAGCTTCCTTTGACGTACTGGCTTTTGGTCAAGGAAGTCAACTGCAAGAGTTCCGACAAGCTACTGGTTTAG
AATTAGCAGTTACTTTATCTGTCAACCATTGGAATGGGAACACGAGTCTCCAATTCATGTTAGTAGATGCTCGTGTTGAC
GGAGTGCAACTTCTTGACTTAAGGACAAAAACAGCCAAAGTTCCTGAAGGTATTCCGACTATTGAAGAAGACCCAAATGC
CAGAGTCATTCTGATTAATGACATCCCTGAAGATTTCAAAGCCTGGCGCAACCAGTTTGTTCACAAGGATTTTGACGCCA
TCTATTTTAAAAATCAGATGAAACATCCTTATTATTTAACAGGATTTGGCAGCAGAGAGCAGTTTGCCAAGCTCTACAAA
ACCATCTATCAGTTTCCTGAATTTGATTTACGGCATAAATTGACAGAGTTGAGTCACTATTTAAACATAGAAAAACTTTT
ACTGATTAAGTTGATTCAAATTTTTGAAGAGTTGTCTTTTGTGACGATTGACGATGGGCTGATGACGGTTAACCCCCAAG
CGCAAAAACGAGAGATTTCAGAGAGCCACATTTACCAAGACTTAAAAGAATTGGTGAAATTTCAAGAAATCATGGCTTTG
GCTAGCCCGAAAGAGATGTATGATTATTTGGTGAAATCAAACGATCAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recJ Streptococcus pneumoniae strain D39V

62.737

100

0.629

  recJ Bacillus subtilis subsp. subtilis str. 168

34.866

100

0.371


Multiple sequence alignment