Detailed information    

insolico Bioinformatically predicted

Overview

Name   recN   Type   Machinery gene
Locus tag   ETT71_RS06140 Genome accession   NZ_CP035428
Coordinates   1195779..1197440 (-) Length   553 a.a.
NCBI ID   WP_136093440.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emmSTG866.1     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1190779..1202440
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT71_RS06115 (ETT71_06110) - 1191834..1192109 (-) 276 WP_002983920.1 HU family DNA-binding protein -
  ETT71_RS06120 (ETT71_06115) - 1192208..1192795 (-) 588 WP_002989129.1 YpmS family protein -
  ETT71_RS06125 (ETT71_06120) - 1192773..1193615 (-) 843 WP_002992620.1 SGNH/GDSL hydrolase family protein -
  ETT71_RS06130 (ETT71_06125) - 1193608..1194447 (-) 840 WP_002989125.1 DegV family protein -
  ETT71_RS06135 (ETT71_06130) - 1194675..1195607 (-) 933 WP_136093441.1 LPXTG cell wall anchor domain-containing protein -
  ETT71_RS06140 (ETT71_06135) recN 1195779..1197440 (-) 1662 WP_136093440.1 DNA repair protein RecN Machinery gene
  ETT71_RS06145 (ETT71_06140) - 1197462..1197932 (-) 471 WP_002983907.1 arginine repressor -
  ETT71_RS06150 (ETT71_06145) - 1197919..1198746 (-) 828 WP_136038478.1 TlyA family RNA methyltransferase -
  ETT71_RS06155 (ETT71_06150) - 1198739..1199611 (-) 873 WP_011284950.1 polyprenyl synthetase family protein -
  ETT71_RS06160 (ETT71_06155) - 1199611..1199826 (-) 216 WP_126426911.1 exodeoxyribonuclease VII small subunit -
  ETT71_RS06165 (ETT71_06160) xseA 1199804..1201144 (-) 1341 WP_136093439.1 exodeoxyribonuclease VII large subunit -
  ETT71_RS06170 (ETT71_06165) - 1201297..1202151 (-) 855 WP_136093438.1 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase -

Sequence

Protein


Download         Length: 553 a.a.        Molecular weight: 62198.32 Da        Isoelectric Point: 4.6120

>NTDB_id=301009 ETT71_RS06140 WP_136093440.1 1195779..1197440(-) (recN) [Streptococcus pyogenes strain emmSTG866.1]
MLLEISIKNFAIIDEISLNFENGMTVLTGETGAGKSIIIDAMNMMLGARASTEVIRRGANKAEIEGFFSVDATPELVACL
ESSGIAMEEELIIRRDIFANGRSVSRINGQMVNLATLKQVGQFLVDIHGQHDQEELMRPQLHQQILDAFGDKAFEQLKEN
YQLIFDRYKSLRRQVIDKQKNEKEHKDRIDMLAFQIAEIEAAALSRGEDDRLNQERDRLMNHKQIADTLTNAYVMLDNDD
FSSLSNIRSSMNDLLSIEQFDSEYKGMSTSISEAYYILEEVSKQLSDTIDQLDSDGGRLQEIEFRLDTLNSLTRKYGGSV
NDVLDYYDNIIKEYQLLTGDDLSSGDLESELKALEKQLVAAATNLSERRHQLAEQLEAEIKAELKELYMEKADFKVHFTT
SKFNRDGNESLEFYISTNPGEGFKPLVKVASGGELSRLMLAIKAAISRKEDKTSIVFDEVDTGVSGRVAQAIAQKIYKIG
RHGQVLAISHLPQVIAIADYQYFISKESKEESTVSKVRLLTPEERVEEIASMIAGTDMTQAALTQARELLAKH

Nucleotide


Download         Length: 1662 bp        

>NTDB_id=301009 ETT71_RS06140 WP_136093440.1 1195779..1197440(-) (recN) [Streptococcus pyogenes strain emmSTG866.1]
ATGTTATTAGAAATTTCTATTAAAAATTTTGCTATTATTGATGAAATTTCCCTAAATTTTGAAAATGGTATGACGGTTTT
GACGGGTGAAACTGGAGCAGGAAAGTCTATTATCATTGATGCTATGAATATGATGCTTGGTGCGCGTGCTAGTACAGAAG
TGATTCGTCGTGGAGCTAATAAAGCAGAAATTGAGGGGTTCTTTTCGGTAGATGCTACCCCAGAACTGGTTGCGTGTCTG
GAATCATCAGGTATTGCTATGGAAGAAGAACTGATTATTCGCCGAGATATCTTTGCCAATGGCAGAAGCGTGAGTCGCAT
TAATGGTCAGATGGTTAACCTAGCCACCTTAAAACAGGTCGGACAGTTTTTGGTAGATATTCATGGGCAACATGACCAAG
AAGAATTAATGCGACCACAGCTCCACCAGCAAATTTTGGACGCTTTTGGTGATAAGGCTTTTGAGCAATTGAAAGAGAAC
TATCAGCTTATTTTTGATCGTTATAAAAGCTTGCGTCGCCAGGTTATTGACAAACAAAAAAATGAAAAGGAACACAAAGA
TCGTATTGATATGTTGGCCTTTCAGATAGCAGAAATTGAAGCTGCTGCCTTGAGTCGAGGTGAGGACGACCGGTTAAATC
AGGAACGTGATCGCTTAATGAACCACAAACAAATTGCTGATACCCTGACCAATGCCTACGTCATGCTAGATAATGACGAT
TTTTCAAGTCTATCCAATATTCGCTCTAGCATGAATGACTTACTATCAATTGAGCAGTTTGATTCAGAGTACAAAGGGAT
GTCGACTTCGATTTCTGAAGCCTATTATATTCTTGAAGAAGTGAGCAAGCAATTATCAGATACCATTGACCAACTGGATT
CTGATGGTGGGCGATTACAGGAAATTGAATTTCGCTTGGATACACTCAATAGCTTAACCCGTAAATACGGTGGTAGTGTG
AATGATGTGCTTGACTACTACGATAATATTATCAAAGAATACCAGCTATTAACAGGAGATGATTTGTCTTCAGGGGACCT
AGAATCAGAATTGAAAGCCTTAGAAAAACAATTGGTTGCTGCAGCCACTAACTTGAGTGAACGCCGCCATCAATTGGCGG
AGCAATTAGAAGCTGAGATTAAAGCTGAACTTAAGGAACTTTATATGGAAAAAGCAGATTTCAAAGTTCACTTTACCACA
TCAAAATTCAATCGTGATGGTAATGAAAGCTTGGAATTTTACATCTCTACTAATCCAGGCGAAGGATTCAAGCCCCTTGT
CAAGGTGGCTTCTGGAGGAGAGTTATCACGCCTTATGTTAGCCATCAAGGCTGCTATTTCTAGAAAAGAAGATAAGACGA
GTATTGTTTTTGATGAAGTAGATACAGGTGTTTCTGGTCGCGTTGCGCAAGCCATTGCCCAAAAAATTTATAAAATTGGG
CGACATGGGCAAGTTCTCGCTATTTCACACTTACCTCAAGTTATTGCTATTGCTGATTATCAGTATTTTATTTCTAAAGA
AAGTAAAGAAGAGTCCACCGTTTCTAAGGTAAGGTTATTAACTCCTGAAGAACGTGTGGAAGAAATTGCTAGCATGATTG
CAGGAACAGATATGACACAAGCTGCTCTTACGCAGGCTCGTGAACTACTTGCCAAACATTAA

Domains

Predicted by InterProScan.

RecF/RecN/SMC N terminal domain (SMC_N)

(2-511)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recN Bacillus subtilis subsp. subtilis str. 168

43.838

100

0.45

Multiple sequence alignment