Detailed information    

insolico Bioinformatically predicted

Overview


Name   braS   Type   Regulator
Locus tag   CSC60_RS02855 Genome accession   NZ_CP030323
Coordinates   602309..603196 (+) Length   295 a.a.
NCBI ID   WP_000143422.1    Uniprot ID   A0AB73JC73
Organism   Staphylococcus aureus strain AR_475     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 597309..608196
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CSC60_RS02825 (CSC60_0530) - 598041..598802 (+) 762 WP_000323448.1 alpha/beta hydrolase family protein -
  CSC60_RS02830 (CSC60_0531) - 599047..599502 (+) 456 WP_000106183.1 MarR family winged helix-turn-helix transcriptional regulator -
  CSC60_RS14610 - 599624..599725 (+) 102 WP_000731972.1 SE2200 family small protein -
  CSC60_RS02840 (CSC60_0532) - 599785..601209 (-) 1425 WP_000953738.1 alkaline phosphatase -
  CSC60_RS02845 (CSC60_0533) - 601407..601607 (+) 201 WP_000604725.1 hypothetical protein -
  CSC60_RS02850 (CSC60_0534) braR 601633..602298 (+) 666 WP_112380505.1 nisin susceptibility-associated two-component system response regulator NsaR Regulator
  CSC60_RS02855 (CSC60_0535) braS 602309..603196 (+) 888 WP_000143422.1 nisin susceptibility-associated two-component system sensor histidine kinase NsaS Regulator
  CSC60_RS02860 (CSC60_0536) - 603304..604059 (+) 756 WP_000923775.1 ABC transporter ATP-binding protein -
  CSC60_RS02865 (CSC60_0537) - 604056..606056 (+) 2001 WP_000776725.1 ABC transporter permease -
  CSC60_RS02870 (CSC60_0538) - 606725..606838 (+) 114 WP_078065157.1 hypothetical protein -
  CSC60_RS02880 - 607220..607480 (+) 261 WP_011382405.1 hypothetical protein -
  CSC60_RS02885 (CSC60_0539) - 607490..607987 (+) 498 WP_001065268.1 glutathione peroxidase -
  CSC60_RS02890 - 608095..608187 (-) 93 WP_010956583.1 hypothetical protein -

Sequence


Protein


Download         Length: 295 a.a.        Molecular weight: 34031.29 Da        Isoelectric Point: 5.8962

>NTDB_id=300781 CSC60_RS02855 WP_000143422.1 602309..603196(+) (braS) [Staphylococcus aureus strain AR_475]
MTFLKSITQEIAIVIVIFALFGLMFYLYHLPLEAYLLALGVILLLLLIFIGIKYLSFVKTISQQQQIENLENALYQLKNE
QIEYKNDVESYFLTWVHQMKTPITAAQLLLERDEPNVVNRVRQEVIQIDNYTSLALSYLKLLNETSDISVTKISINNIIR
PIIMKYSIQFIDQKTKIHYEPCHHEVLTDVRWTSLMIEQLINNALKYARGKDIWIEFDEQSNQLYVKDNGVGISEADLPK
IFDKGYSGYNGQRQSNSSGIGLFIVKQISTHTNHPVSVVSKQNEGTTFTIQFPDE

Nucleotide


Download         Length: 888 bp        

>NTDB_id=300781 CSC60_RS02855 WP_000143422.1 602309..603196(+) (braS) [Staphylococcus aureus strain AR_475]
ATGACCTTTCTTAAAAGTATTACTCAGGAAATAGCAATAGTCATAGTTATTTTTGCTTTATTTGGCTTAATGTTTTACCT
GTATCATTTGCCATTAGAAGCATATTTACTAGCACTTGGCGTTATTTTATTATTATTACTCATATTCATAGGTATTAAAT
ATTTAAGTTTTGTAAAAACTATAAGCCAACAACAACAAATTGAAAACTTAGAAAATGCGTTGTATCAGCTTAAAAATGAA
CAAATTGAATATAAAAATGATGTAGAGAGCTACTTTTTAACATGGGTACATCAAATGAAAACACCCATTACTGCAGCACA
ACTGTTACTTGAAAGAGATGAGCCTAATGTTGTGAATCGTGTTCGTCAAGAGGTTATTCAAATTGATAACTATACAAGTT
TAGCACTTAGTTATTTAAAGTTATTAAATGAAACTTCTGATATTTCTGTCACTAAAATTTCGATTAACAATATCATTCGC
CCAATTATTATGAAATATTCAATACAGTTTATTGATCAAAAAACAAAAATCCATTATGAACCTTGTCATCACGAAGTATT
AACTGACGTTAGATGGACCTCTTTAATGATAGAACAATTAATAAATAATGCACTTAAGTATGCGAGAGGTAAAGATATAT
GGATTGAATTTGATGAGCAATCCAATCAATTATACGTAAAAGATAATGGTGTTGGTATTAGTGAAGCGGACTTGCCTAAA
ATATTTGATAAGGGCTATTCAGGTTATAATGGCCAGCGCCAAAGTAACTCAAGTGGGATTGGTTTATTTATCGTAAAACA
AATTTCAACTCACACAAACCATCCTGTTTCAGTCGTATCTAAACAAAATGAGGGTACAACATTTACGATTCAATTTCCAG
ATGAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

98.983

100

0.99


Multiple sequence alignment