Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   DRA80_RS16155 Genome accession   NZ_CP030311
Coordinates   3308009..3308605 (-) Length   198 a.a.
NCBI ID   WP_004150836.1    Uniprot ID   A0A0H3GL50
Organism   Klebsiella pneumoniae strain 11454     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 3303009..3313605
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DRA80_RS16140 (DRA80_16465) helD 3303217..3305271 (-) 2055 WP_004213261.1 DNA helicase IV -
  DRA80_RS16145 (DRA80_16470) - 3305396..3305842 (+) 447 WP_002898425.1 YccF domain-containing protein -
  DRA80_RS16150 (DRA80_16475) yccS 3305860..3307995 (+) 2136 WP_004213263.1 YccS family putative transporter -
  DRA80_RS16155 (DRA80_16480) sxy/tfoX 3308009..3308605 (-) 597 WP_004150836.1 TfoX/Sxy family DNA transformation protein Regulator
  DRA80_RS16160 (DRA80_16490) sulA 3308954..3309463 (+) 510 WP_002898418.1 SOS-induced cell division inhibitor SulA -
  DRA80_RS16165 (DRA80_16495) ompA 3309816..3310886 (+) 1071 WP_002898408.1 porin OmpA -
  DRA80_RS16170 (DRA80_16500) matP 3311019..3311471 (-) 453 WP_002898404.1 macrodomain Ter protein MatP -
  DRA80_RS16175 (DRA80_16505) - 3311657..3313414 (+) 1758 WP_004147851.1 AAA family ATPase -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22576.15 Da        Isoelectric Point: 10.1298

>NTDB_id=300694 DRA80_RS16155 WP_004150836.1 3308009..3308605(-) (sxy/tfoX) [Klebsiella pneumoniae strain 11454]
MRKLVCPRLPQFQACVSPLGQLHTRPLFGGYSLAIDDTVFAMVAEGNIYLKACEQSAAYRVEHRNPLLTLRRHGRIVPLK
YYQIDDTLWRDEQQLFRLSLLSWQSAQREKNYRRASGRLKDLPNISFHMELQLIHAGIPDVRTLREVGAQEAWLRLRVNN
ASLSLSVLLALEGAIAGVHAAALPTPRRQELLEWAATR

Nucleotide


Download         Length: 597 bp        

>NTDB_id=300694 DRA80_RS16155 WP_004150836.1 3308009..3308605(-) (sxy/tfoX) [Klebsiella pneumoniae strain 11454]
ATGAGAAAACTAGTTTGTCCGCGGCTCCCGCAATTTCAGGCCTGCGTCTCACCGCTGGGTCAACTGCATACTCGTCCGCT
CTTTGGCGGCTACAGCCTGGCTATTGATGATACGGTGTTTGCGATGGTGGCCGAGGGGAACATTTATCTGAAGGCCTGCG
AGCAGAGCGCTGCTTATCGGGTGGAACATCGTAATCCTCTGTTAACGCTGCGCCGACACGGCCGCATAGTGCCGCTGAAG
TATTATCAAATTGACGACACTTTATGGCGCGATGAGCAGCAGCTTTTTCGGCTATCGCTACTGTCGTGGCAGAGTGCGCA
GCGCGAAAAGAACTACCGACGGGCGTCGGGCCGCCTGAAAGATTTACCCAATATCAGCTTTCATATGGAATTGCAGCTGA
TTCACGCGGGCATACCGGACGTTAGGACGTTGCGGGAAGTTGGTGCGCAGGAGGCATGGTTGAGGCTACGCGTAAATAAT
GCTTCTTTATCGCTGAGCGTATTGCTGGCGCTGGAGGGGGCGATTGCCGGGGTACATGCCGCCGCGCTCCCGACGCCACG
GCGTCAGGAGCTTCTCGAATGGGCGGCTACCCGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(117-194)

TfoX N-terminal domain (TfoX_N)

(16-105)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H3GL50

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

51.269

99.495

0.51

Multiple sequence alignment