Detailed information
Bioinformatically predicted
Overview
| Name | comGH | Type | Machinery gene |
| Locus tag | SP70585_RS10585 | Genome accession | NC_012468 |
| Coordinates | 1953917..1954870 (-) | Length | 317 a.a. |
| NCBI ID | WP_000345132.1 | Uniprot ID | - |
| Organism | Streptococcus pneumoniae 70585 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1948917..1959870
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SP70585_RS10560 (SP70585_2125) | - | 1949678..1950301 (-) | 624 | WP_000932637.1 | hypothetical protein | - |
| SP70585_RS10565 (SP70585_2126) | jag | 1950352..1951338 (-) | 987 | WP_000260024.1 | RNA-binding cell elongation regulator Jag/EloR | - |
| SP70585_RS10570 (SP70585_2127) | - | 1951357..1952181 (-) | 825 | WP_000727911.1 | membrane protein insertase YidC | - |
| SP70585_RS10575 (SP70585_2128) | rnpA | 1952156..1952527 (-) | 372 | WP_000739246.1 | ribonuclease P protein component | - |
| SP70585_RS14190 (SP70585_2129) | - | 1952544..1952675 (-) | 132 | WP_000768904.1 | hypothetical protein | - |
| SP70585_RS10580 (SP70585_2130) | - | 1952676..1953866 (-) | 1191 | WP_000167770.1 | acetate kinase | - |
| SP70585_RS10585 (SP70585_2131) | comGH | 1953917..1954870 (-) | 954 | WP_000345132.1 | class I SAM-dependent methyltransferase | Machinery gene |
| SP70585_RS12905 | - | 1955216..1956018 (+) | 803 | Protein_1995 | IS5 family transposase | - |
| SP70585_RS10600 (SP70585_2134) | - | 1956169..1956645 (+) | 477 | WP_000777686.1 | GNAT family N-acetyltransferase | - |
| SP70585_RS10605 (SP70585_2135) | comGG/cglG | 1957300..1957713 (-) | 414 | WP_000265615.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| SP70585_RS10610 (SP70585_2136) | comGF/cglF | 1957691..1958152 (-) | 462 | WP_000250520.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| SP70585_RS10615 (SP70585_2137) | comGE/cglE | 1958115..1958417 (-) | 303 | WP_000413382.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| SP70585_RS10620 (SP70585_2138) | comGD/cglD | 1958380..1958814 (-) | 435 | WP_033606693.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| SP70585_RS10625 (SP70585_2139) | comGC/cglC | 1958777..1959100 (-) | 324 | WP_000738628.1 | comG operon protein ComGC | Machinery gene |
Sequence
Protein
Download Length: 317 a.a. Molecular weight: 35661.78 Da Isoelectric Point: 4.1925
>NTDB_id=30062 SP70585_RS10585 WP_000345132.1 1953917..1954870(-) (comGH) [Streptococcus pneumoniae 70585]
MDFEKIEQAYTYLLENVQVIQSDLATNFYDALVEQNSIYLDGETELNQVKDNNQALKRLALRKEEWLKTYQFLLMKAGQT
EPLQANHQFTPDAIALLLVFIVEELFTEEEITILEMGSGMGILGATFLTSLAKKVDYLGMEMDDLLIDLAASMADVIGLQ
AGFVQGDAVRPQMLKESDVVISDLPVGYYPDDAVASRHQVASSQEHTYAHHLLMEQGLKYLKSDGYAIFLAPSDLLTSPQ
SDLLKEWLKEEASLVAMISLPENLFANANQSKTIFILQKKNEIAVEPFVYPLASLQDASVLMKFKENFQKWTQGTEI
MDFEKIEQAYTYLLENVQVIQSDLATNFYDALVEQNSIYLDGETELNQVKDNNQALKRLALRKEEWLKTYQFLLMKAGQT
EPLQANHQFTPDAIALLLVFIVEELFTEEEITILEMGSGMGILGATFLTSLAKKVDYLGMEMDDLLIDLAASMADVIGLQ
AGFVQGDAVRPQMLKESDVVISDLPVGYYPDDAVASRHQVASSQEHTYAHHLLMEQGLKYLKSDGYAIFLAPSDLLTSPQ
SDLLKEWLKEEASLVAMISLPENLFANANQSKTIFILQKKNEIAVEPFVYPLASLQDASVLMKFKENFQKWTQGTEI
Nucleotide
Download Length: 954 bp
>NTDB_id=30062 SP70585_RS10585 WP_000345132.1 1953917..1954870(-) (comGH) [Streptococcus pneumoniae 70585]
ATGGATTTTGAAAAAATTGAACAAGCCTATACCTATTTACTAGAGAATGTCCAAGTCATCCAAAGTGATTTGGCGACCAA
CTTTTATGACGCCTTGGTGGAGCAAAACAGCATCTATCTGGATGGTGAAACTGAGCTAAACCAGGTCAAAGACAACAATC
AGGCCCTTAAGCGTTTAGCACTACGCAAAGAAGAATGGCTCAAGACCTACCAGTTTCTCTTGATGAAGGCTGGACAAACA
GAACCCTTGCAGGCCAATCACCAGTTTACGCCAGATGCTATTGCCTTACTTTTGGTATTTATTGTGGAAGAGTTGTTTAC
AGAGGAGGAAATCACTATCCTTGAAATGGGTTCTGGGATGGGAATTCTAGGCGCTACTTTCTTAACCTCGCTTGCTAAAA
AAGTGGATTACTTGGGAATGGAAATGGATGATTTGCTGATTGATTTGGCAGCTAGTATGGCAGATGTAATTGGTTTGCAG
GCTGGCTTTGTCCAAGGAGATGCCGTTCGTCCACAAATGCTCAAAGAAAGCGATGTGGTCATCAGTGACTTGCCTGTTGG
CTATTATCCTGATGATGCCGTTGCGTCGCGCCATCAAGTTGCTTCTAGCCAAGAACATACTTACGCCCATCACTTGCTCA
TGGAACAAGGGCTTAAGTACCTCAAGTCAGACGGATACGCTATTTTTCTAGCTCCGAGTGATTTGTTGACCAGTCCTCAA
AGTGATTTGTTAAAAGAATGGCTGAAAGAAGAGGCGAGTCTGGTTGCTATGATTAGTCTGCCTGAAAATCTCTTTGCTAA
TGCCAACCAATCTAAGACTATTTTTATCCTACAGAAGAAAAATGAAATAGCAGTAGAGCCTTTTGTTTATCCACTTGCTA
GCTTGCAAGATGCAAGTGTTTTAATGAAATTTAAAGAAAATTTTCAAAAATGGACTCAAGGTACTGAAATATAA
ATGGATTTTGAAAAAATTGAACAAGCCTATACCTATTTACTAGAGAATGTCCAAGTCATCCAAAGTGATTTGGCGACCAA
CTTTTATGACGCCTTGGTGGAGCAAAACAGCATCTATCTGGATGGTGAAACTGAGCTAAACCAGGTCAAAGACAACAATC
AGGCCCTTAAGCGTTTAGCACTACGCAAAGAAGAATGGCTCAAGACCTACCAGTTTCTCTTGATGAAGGCTGGACAAACA
GAACCCTTGCAGGCCAATCACCAGTTTACGCCAGATGCTATTGCCTTACTTTTGGTATTTATTGTGGAAGAGTTGTTTAC
AGAGGAGGAAATCACTATCCTTGAAATGGGTTCTGGGATGGGAATTCTAGGCGCTACTTTCTTAACCTCGCTTGCTAAAA
AAGTGGATTACTTGGGAATGGAAATGGATGATTTGCTGATTGATTTGGCAGCTAGTATGGCAGATGTAATTGGTTTGCAG
GCTGGCTTTGTCCAAGGAGATGCCGTTCGTCCACAAATGCTCAAAGAAAGCGATGTGGTCATCAGTGACTTGCCTGTTGG
CTATTATCCTGATGATGCCGTTGCGTCGCGCCATCAAGTTGCTTCTAGCCAAGAACATACTTACGCCCATCACTTGCTCA
TGGAACAAGGGCTTAAGTACCTCAAGTCAGACGGATACGCTATTTTTCTAGCTCCGAGTGATTTGTTGACCAGTCCTCAA
AGTGATTTGTTAAAAGAATGGCTGAAAGAAGAGGCGAGTCTGGTTGCTATGATTAGTCTGCCTGAAAATCTCTTTGCTAA
TGCCAACCAATCTAAGACTATTTTTATCCTACAGAAGAAAAATGAAATAGCAGTAGAGCCTTTTGTTTATCCACTTGCTA
GCTTGCAAGATGCAAGTGTTTTAATGAAATTTAAAGAAAATTTTCAAAAATGGACTCAAGGTACTGAAATATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGH | Streptococcus mutans UA140 |
54.313 |
98.738 |
0.536 |
| comGH | Streptococcus mutans UA159 |
53.994 |
98.738 |
0.533 |