Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   ETL58_RS18085 Genome accession   NZ_CP035413
Coordinates   3454308..3455021 (-) Length   237 a.a.
NCBI ID   WP_003244535.1    Uniprot ID   O06978
Organism   Bacillus subtilis strain SRCM103629     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 3449308..3460021
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETL58_RS18065 (ETL58_18065) ghrB 3449452..3450429 (+) 978 WP_072557265.1 D-glycerate dehydrogenase -
  ETL58_RS18070 (ETL58_18070) psdB 3450467..3452407 (-) 1941 WP_101172216.1 lantibiotic ABC transporter permease PsdB -
  ETL58_RS18075 (ETL58_18075) psdA 3452382..3453161 (-) 780 WP_003228167.1 lantibiotic ABC transporter ATP-binding protein PsdA -
  ETL58_RS18080 (ETL58_18080) psdS 3453244..3454314 (-) 1071 WP_029318347.1 two-component sensor histidine kinase PsdS -
  ETL58_RS18085 (ETL58_18085) braR 3454308..3455021 (-) 714 WP_003244535.1 two-component system response regulator PsdR Regulator
  ETL58_RS18090 (ETL58_18090) - 3455168..3455377 (+) 210 WP_029318346.1 hypothetical protein -
  ETL58_RS18095 (ETL58_18095) yvcN 3455413..3456177 (-) 765 WP_015251150.1 arylamine N-acetyltransferase -
  ETL58_RS18100 (ETL58_18100) crh 3456178..3456435 (-) 258 WP_003219835.1 HPr family phosphocarrier protein -
  ETL58_RS18105 (ETL58_18105) whiA 3456459..3457409 (-) 951 WP_003243775.1 DNA-binding protein WhiA -
  ETL58_RS18110 (ETL58_18110) mgfK 3457432..3458385 (-) 954 WP_003244450.1 gluconeogenesis morphogenetic factor -
  ETL58_RS18115 (ETL58_18115) rapZ 3458387..3459274 (-) 888 WP_003243903.1 RNase adapter RapZ -
  ETL58_RS18120 (ETL58_18120) rppI 3459299..3459775 (-) 477 WP_080265396.1 8-oxo-dGTP diphosphatase -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27514.39 Da        Isoelectric Point: 4.6062

>NTDB_id=300586 ETL58_RS18085 WP_003244535.1 3454308..3455021(-) (braR) [Bacillus subtilis strain SRCM103629]
MYRILLVEDDERIASLLGGHLQKYGYEVKIAEQLNDIKLEFAEMKPDLVLLDINLPFFDGFYWCRQIRTISNAPIIFISA
RTDELNQVMAIENGGDDYITKPFHLEVVMAKIKSVLRRTYGEYSPSLPQESRIVELGGLTIYPDQNEAEWNSVRILFSQK
EFQLLSIFVREHKKIVSRDELLEALWDDVDFVDDNTLTVNVNRLRRKLENAGLTDCISTIRGQGYQFQVNRKDEAEC

Nucleotide


Download         Length: 714 bp        

>NTDB_id=300586 ETL58_RS18085 WP_003244535.1 3454308..3455021(-) (braR) [Bacillus subtilis strain SRCM103629]
GTGTATCGGATTTTGCTTGTGGAAGATGATGAGCGGATTGCTTCTTTGCTGGGCGGTCATCTTCAAAAATACGGATATGA
AGTGAAAATTGCTGAACAGCTGAATGATATAAAATTGGAATTTGCAGAAATGAAGCCTGATCTTGTGCTGCTTGATATCA
ACCTGCCTTTTTTTGACGGGTTTTATTGGTGCAGGCAAATCCGTACCATTTCCAATGCGCCGATTATCTTTATATCGGCA
CGGACCGATGAGCTGAATCAGGTAATGGCGATTGAAAATGGCGGCGATGATTATATCACAAAGCCGTTCCATCTAGAGGT
AGTGATGGCCAAAATCAAAAGCGTCCTGCGCCGCACATATGGTGAATATTCGCCCTCTTTGCCGCAGGAATCTAGAATAG
TGGAGCTTGGCGGGCTGACGATTTATCCTGATCAGAATGAGGCCGAATGGAACAGCGTCCGGATTTTGTTTTCCCAAAAA
GAATTCCAGCTTCTCTCGATTTTTGTGAGGGAGCATAAAAAAATTGTCTCTCGTGATGAACTATTGGAGGCGTTATGGGA
TGACGTTGATTTTGTCGATGACAATACGTTAACGGTCAATGTCAATCGGCTGCGGAGAAAACTGGAGAATGCAGGACTGA
CAGATTGCATTTCCACAATCAGAGGACAAGGTTATCAATTTCAAGTCAATCGGAAGGATGAAGCGGAATGTTAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(155-227)

Response regulator receiver domain (Response_reg)

(4-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB O06978

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

45.536

94.515

0.43