Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   ETL58_RS09965 Genome accession   NZ_CP035413
Coordinates   1935993..1936610 (-) Length   205 a.a.
NCBI ID   WP_003238209.1    Uniprot ID   G4NVV3
Organism   Bacillus subtilis strain SRCM103629     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1930993..1941610
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETL58_RS09935 (ETL58_09935) yndJ 1931323..1932963 (+) 1641 WP_038429036.1 YndJ family protein -
  ETL58_RS09940 (ETL58_09940) - 1933041..1933355 (+) 315 WP_003245621.1 hypothetical protein -
  ETL58_RS09945 (ETL58_09945) pghL 1933580..1934338 (+) 759 WP_015714006.1 gamma-polyglutamate hydrolase PghL -
  ETL58_RS09950 (ETL58_09950) - 1934365..1934814 (-) 450 WP_176551648.1 YndM family protein -
  ETL58_RS09955 (ETL58_09955) fosM 1935022..1935456 (+) 435 WP_003231604.1 FosM family fosfomycin resistance protein -
  ETL58_RS21760 - 1935365..1935641 (+) 277 Protein_1908 hypothetical protein -
  ETL58_RS09965 (ETL58_09965) dinR/lexA 1935993..1936610 (-) 618 WP_003238209.1 transcriptional repressor LexA Regulator
  ETL58_RS09970 (ETL58_09970) yneA 1936760..1937077 (+) 318 WP_015252003.1 cell division suppressor protein YneA -
  ETL58_RS09975 (ETL58_09975) dinL 1937096..1937749 (+) 654 WP_015714011.1 recombinase family protein -
  ETL58_RS09980 (ETL58_09980) ynzC 1937813..1938046 (+) 234 WP_003231595.1 DUF896 domain-containing protein -
  ETL58_RS09985 (ETL58_09985) recP/tkt 1938215..1940218 (+) 2004 WP_033885144.1 transketolase Machinery gene
  ETL58_RS09990 (ETL58_09990) sirA 1940371..1940817 (+) 447 WP_003231591.1 sporulation inhibitor of replication protein SirA -
  ETL58_RS09995 (ETL58_09995) yneF 1940903..1941121 (+) 219 WP_003221221.1 YneF family protein -
  ETL58_RS10000 (ETL58_10000) ynzD 1941195..1941368 (-) 174 WP_010886518.1 aspartyl-phosphate phosphatase YnzD -

Sequence

Protein


Download         Length: 205 a.a.        Molecular weight: 22849.36 Da        Isoelectric Point: 5.1450

>NTDB_id=300533 ETL58_RS09965 WP_003238209.1 1935993..1936610(-) (dinR/lexA) [Bacillus subtilis strain SRCM103629]
MTKLSKRQLDILRFIKAEVKSKGYPPSVREIGEAVGLASSSTVHGHLARLETKGLIRRDPTKPRAIEILDEEVDIPQSQV
VNVPVIGKVTAGSPITAVENIEEYFPLPDRMVPPDEHVFMLEIMGDSMIDAGILDKDYVIVKQQNTANNGEIVVAMTEDD
EATVKRFYKEDTHIRLQPENPTMEPIILQNVSILGKVIGVFRTVH

Nucleotide


Download         Length: 618 bp        

>NTDB_id=300533 ETL58_RS09965 WP_003238209.1 1935993..1936610(-) (dinR/lexA) [Bacillus subtilis strain SRCM103629]
ATGACGAAGCTATCAAAAAGGCAACTTGATATCCTCCGTTTTATTAAAGCAGAGGTTAAATCAAAAGGATATCCGCCTTC
CGTGAGAGAGATCGGAGAGGCTGTCGGGCTTGCGTCCAGCTCTACTGTCCACGGCCATTTGGCCCGCTTGGAAACAAAAG
GGCTGATCAGACGGGATCCGACAAAACCAAGAGCAATAGAAATTCTTGATGAAGAAGTAGACATTCCGCAAAGCCAGGTC
GTTAATGTACCGGTCATCGGGAAAGTCACGGCGGGATCTCCTATTACAGCAGTAGAAAATATTGAAGAATATTTTCCGCT
CCCAGACCGCATGGTTCCTCCAGACGAGCATGTATTTATGCTGGAGATTATGGGAGACAGTATGATAGATGCTGGTATTC
TCGATAAGGACTATGTCATCGTTAAACAGCAAAACACAGCGAACAATGGGGAAATTGTAGTTGCGATGACAGAAGATGAT
GAAGCAACTGTAAAACGATTCTATAAAGAGGATACCCACATTCGCTTGCAGCCTGAGAACCCAACGATGGAACCTATCAT
TTTGCAGAATGTCAGCATTCTAGGGAAAGTGATTGGCGTGTTCAGAACCGTCCATTAA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(1-65)

Peptidase S24-like (Peptidase_S24)

(84-198)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVV3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

100

100

1