Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   DQQ01_RS04130 Genome accession   NZ_CP030280
Coordinates   826584..828419 (+) Length   611 a.a.
NCBI ID   WP_111918637.1    Uniprot ID   -
Organism   Blautia argi strain KCTC 15426     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 821584..833419
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQQ01_RS18045 (DQQ01_04115) - 821740..823105 (+) 1366 Protein_802 MATE family efflux transporter -
  DQQ01_RS04115 (DQQ01_04120) - 823169..823711 (-) 543 WP_111918631.1 shikimate kinase -
  DQQ01_RS04120 (DQQ01_04125) - 823952..824395 (+) 444 WP_111918633.1 MarR family winged helix-turn-helix transcriptional regulator -
  DQQ01_RS04125 (DQQ01_04130) - 824423..826591 (+) 2169 WP_111918635.1 ABC transporter ATP-binding protein -
  DQQ01_RS04130 (DQQ01_04135) rcrQ 826584..828419 (+) 1836 WP_111918637.1 ABC transporter ATP-binding protein Regulator
  DQQ01_RS04145 (DQQ01_04150) - 828888..829226 (-) 339 WP_111918641.1 hypothetical protein -
  DQQ01_RS04155 (DQQ01_04160) - 829663..830511 (+) 849 WP_111918643.1 MBL fold metallo-hydrolase -
  DQQ01_RS04160 (DQQ01_04165) - 830635..831384 (+) 750 WP_162624238.1 MBL fold metallo-hydrolase -
  DQQ01_RS04165 (DQQ01_04170) - 831344..833050 (+) 1707 WP_242980559.1 glycoside hydrolase family 3 protein -

Sequence

Protein


Download         Length: 611 a.a.        Molecular weight: 68159.86 Da        Isoelectric Point: 6.8285

>NTDB_id=300530 DQQ01_RS04130 WP_111918637.1 826584..828419(+) (rcrQ) [Blautia argi strain KCTC 15426]
MSNARRGHMGGHGGGMSGEKAKDFKTAMKRLLSYMKRYRPQMACMFVFAIGSTVFSIIGPKILGKATTELYTGLVSKING
GSGIDFGKIAAILLWVLGLYMVSALFSFIQGLIMTGISNNVTYNLRKDISAKINRIPMKYFESRTHGEILSRITNDVDTL
QASINQSFTQLITSVTMLVGVFIMMLSINVYMTLAAVLILPVSMLIIGKVMKHSQKYFQAQQRYLGEVNGQVEEIYSGHN
VVKAFNKEEEVIRTFEETNEKLYTSGWRSQFFSGMMMPIMQFVGNLGYVMVALLGGFMVIKGKVMVGDIQAFFQYIRNFT
QPIQQIAQVTNMLQSSAAAAERVFEFLDEEEEDQIVENPVDISHIEGNVEAKHVAFGYNPDHLIIHDFNGVVKAGQKVAI
VGPTGAGKTTMIKLLMRFYDVNSGEILIDGHNLKDFNRPQLRELFGMVLQETWLFHGTIMENIRYGRLDATDEEVIAAAK
AAHAHHFIMSQPGGYQMELNEETSNISQGQKQLLTIARAILADNKILILDEATSSVDTRTEERIQAAMDNLMKGRTSFVI
AHRLSTIRDADLILVMKDGDIIEQGTHESLLAAQGFYANLYNSQFEKAEAV

Nucleotide


Download         Length: 1836 bp        

>NTDB_id=300530 DQQ01_RS04130 WP_111918637.1 826584..828419(+) (rcrQ) [Blautia argi strain KCTC 15426]
ATGAGTAATGCAAGAAGAGGCCATATGGGAGGACATGGCGGCGGTATGTCCGGAGAAAAGGCAAAAGATTTTAAAACAGC
CATGAAAAGACTGCTTTCCTATATGAAACGCTATCGCCCGCAAATGGCATGTATGTTTGTTTTTGCTATTGGCAGCACAG
TATTCAGTATCATCGGGCCAAAGATTTTGGGAAAGGCAACCACAGAGCTGTATACAGGTCTGGTGTCTAAAATCAATGGC
GGCAGCGGTATTGATTTTGGGAAGATTGCAGCCATTCTTTTGTGGGTATTGGGGCTGTATATGGTCAGCGCCCTGTTCTC
CTTTATCCAGGGATTGATTATGACTGGAATTTCCAACAATGTAACCTACAACCTGAGAAAAGATATTTCGGCAAAAATCA
ACCGGATTCCCATGAAATATTTTGAGAGCAGAACCCACGGGGAAATCCTTTCCAGAATCACTAATGATGTGGATACTTTG
CAGGCAAGCATTAACCAGAGTTTTACCCAGCTCATTACTTCAGTAACCATGCTGGTAGGGGTGTTTATTATGATGCTTTC
CATTAATGTGTATATGACTCTGGCAGCAGTTCTGATTTTGCCGGTGTCCATGCTGATTATCGGGAAGGTGATGAAGCACT
CCCAGAAATACTTCCAGGCGCAGCAGAGATACCTGGGGGAAGTAAACGGACAGGTGGAGGAAATTTACAGTGGTCACAAT
GTGGTAAAGGCATTTAACAAAGAGGAGGAGGTTATCCGTACTTTCGAGGAAACCAATGAAAAGCTGTACACCTCTGGCTG
GCGTTCCCAGTTTTTCTCAGGTATGATGATGCCTATTATGCAGTTTGTGGGAAATCTGGGTTATGTTATGGTTGCCCTTT
TAGGCGGCTTTATGGTAATTAAAGGAAAAGTCATGGTGGGAGATATCCAGGCATTTTTTCAGTATATCCGAAACTTTACA
CAGCCTATTCAGCAAATTGCCCAGGTGACAAATATGTTGCAGTCCTCTGCGGCAGCAGCAGAGCGTGTCTTTGAATTTCT
GGACGAGGAAGAGGAAGACCAGATAGTAGAAAATCCTGTGGATATCAGTCATATTGAGGGAAATGTAGAAGCAAAGCATG
TGGCATTTGGCTATAACCCGGATCACCTGATTATTCATGATTTCAACGGCGTAGTAAAAGCCGGACAGAAGGTTGCCATT
GTAGGTCCTACGGGAGCTGGAAAGACTACCATGATTAAACTTTTGATGCGCTTTTATGATGTAAACTCCGGGGAGATTCT
CATTGACGGGCATAACCTGAAAGATTTCAATCGTCCTCAGCTTCGAGAACTTTTCGGTATGGTGCTTCAGGAAACCTGGC
TGTTCCATGGCACCATCATGGAAAATATCCGGTACGGCAGACTGGACGCTACAGATGAGGAAGTAATTGCAGCAGCAAAA
GCAGCCCATGCCCATCACTTTATTATGTCACAGCCCGGCGGATACCAGATGGAATTAAATGAGGAAACCAGCAATATTTC
TCAGGGACAGAAGCAGCTTCTTACCATTGCAAGGGCAATACTGGCAGATAATAAGATTTTGATTCTGGACGAGGCCACAT
CTTCTGTAGATACCCGAACAGAGGAACGGATTCAGGCGGCAATGGATAATTTGATGAAAGGCAGAACCAGCTTTGTTATT
GCACACAGACTGTCCACAATCCGGGACGCTGACCTGATTCTGGTTATGAAGGATGGGGATATTATTGAACAGGGAACCCA
TGAAAGTCTGCTGGCTGCACAGGGCTTTTATGCAAACCTGTATAACAGCCAGTTTGAAAAGGCAGAGGCAGTCTGA

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(43-322)

ABC transporter (ABC_tran)

(387-534)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

50.512

95.908

0.484

Multiple sequence alignment